Pseudomonas protegens Cab57: PPC_6034 Help Entry PPC_6034          CDS       T03613                                  Symbol tssM Name (GenBank) type VI secretion protein TssM   KO K11891   type VI secretion system protein ImpL Organism ppro  Pseudomonas protegens Cab57 Pathway ppro02025   Biofilm formation - Pseudomonas aeruginosa ppro03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:ppro00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     PPC_6034 (tssM)  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     PPC_6034 (tssM)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:ppro02044]     PPC_6034 (tssM) Secretion system [BR:ppro02044]  Type VI secretion system   Imp/Vas secretion system core components    PPC_6034 (tssM) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF7125 Motif Other DBs NCBI-ProteinID:  BAO65381 LinkDB All DBs Position complement(6657889..6661395) Genome browser AA seq 1168 aa AA seqDB search MKAFFSFVIRWVIPLLGLIALSLIIWFIGPLLEFLVPEGRRWALIIFIFAVWIGYRVFSI IQARRHAAKVLQSLAADTPPDPDSVATAEELAALRQRMDEALALLKKAKLGGDERRNLYE LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG RYTTQDSHAAVDKAAWLGFLDLLKTQRSRRPIDGAFVAISLSDLLLSSEAERAAHAAAIR LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDSLSKEERAQVWGMTFALDDGKSGDSP LAQLPAELAALEQRLNERLVERLQQERDPARRDLIYGFPQQFAALKESLQGFLEGVFKPN AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQTGTGRSYFIEKLFSAV AFAERGLVGVNPKVERRRKWIARGALAATVALVLIVGTLWIVSYRANQAYIAQVDQRVGP VRQDVQSLSPAQRDVLAVLPLLNATRNLAGDAPGWAEGLGLYQGDMLEAESASVYRKLLV AVFAPRLMTRIEEQLHSGGNSDYLYEGLKAYLMLADSEHYDPDFIKAWITLDWERTLARD LPPEQRQALTGHLQALFEKHPPNARLDQRLIDDLRRQLQQLPVAQRVYDRVKRAKLPDGV PDFRLSEAGGRDAALVFTRKSGKPLSEPLSGLFTVKGYREGFLLASLNQAGTLAEEQWVL GRDQADQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRILSGPTSP LKKLLVAVAKETDLQQEERLLAAQGQKVEGGVDQLKQRLGSLLGQEQAGNPAAVASSEDP VSAHFADLNSLVSKGEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQASAAAA RVSLTAERQPPVVQGLVKSVVGSTTNTMMGGVRNQLNAAWVSEVVNVYRQSLSGRYPMSP GSSRDATLEDFGQFFGTGGVMDNYFRKYLQPYVNTSTPTWSWQPGAAQKLGISPGVLQTF QRASNIRDAFFRSSGGTQPAVRFELKPVAMDANISQFLLDLDGQQLSYDHGPSRPVAMQW PNPGSIGVVRLSIMPPSATGRSGITLDGPWAWFRLLEQSDLTATNSPDRFNLRLRVDGAS ISYELRASSAFNPFKSRVLSGFSLPERL NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcgtttttcagttttgtgattcgctgggtgatcccgctgctggggctgatcgcc ctgagcctgatcatctggttcattggcccgttgctggagttcctggtaccggaaggccgg cgttgggcgctgatcatttttatcttcgcggtgtggatcggctaccgggtgtttagcatc atccaggcccgccggcatgcggccaaggtcctgcagagcctggccgccgataccccgccg gacccggacagcgtggccaccgccgaggagctggcggccctgcgccagcgcatggacgaa gccctggcgctgttgaagaaggccaagctcggcggtgacgagcgacgcaacctctacgag ctgccgtggtacgtgatcatcgggccgccgggctcgggcaagaccacggcgctggtcaat tccggcctgcattttcccctggccgctcagttgggcgccggtgcggtgcgtggtgtcggt ggcacccgcaactgcgactggtggttcaccgaccaggccgtgctgctggacacggccggg cgctacaccacccaggacagccatgccgcggtggacaaggcagcctggctgggctttctc gacctgctgaaaacccagcgctcgcggcggcccatcgacggtgccttcgtcgccatcagc ctctccgatctgctgctaagcagcgaggcggagcgggcggctcacgccgcggcgattcgt ctgcgcatccaggagctgtacacccagctgggcgtacgcttccccatctacctgatgctc accaagctcgatctggtgccgggcttcatggagttcttcgactccctgagcaaggaagag cgggcccaggtctggggcatgaccttcgccctggatgacggcaagagtggcgacagcccc ctggcccagttgccggcggagctggcggccctggagcagcgcctcaacgagcgtctggtg gagcgcctgcaacaggagcgcgacccggcgcggcgtgacctgatctacggcttcccgcag caattcgccgcgctcaaggaatccttgcagggcttccttgaaggcgtgttcaaacccaac gctttcgaagagcgcgtgctgctgcgcggggtgtatttcaccagcggcacccaggaaggc agccccatcgaccgcctgatcggcgccatggcccagagcatgaacctggaccgccagcac ctggcacggcagaccggcaccgggcgcagctacttcatcgagaaactgttcagcgccgtg gcctttgccgagcgcgggctggtgggggtcaaccccaaggtcgagcggcggcgcaaatgg atcgctcggggcgccctggctgccaccgtggccctggtgctgatagtcggtaccttgtgg atcgtcagctaccgggccaaccaggcctatatcgcccaggtcgaccagcgggtcggcccg gtgcgccaggacgtgcagagcctgagcccggcccagcgcgatgtgctggcggtgctgccg ctgctcaacgccacgcgcaatctggccggcgatgcgccgggctgggccgaaggactgggc ctgtatcagggcgacatgctcgaagccgagtccgccagtgtctatcgcaagctgctggtg gcggtgttcgccccgcgtttgatgacccgcatcgaagagcaactgcacagcggcggcaac tcggactacctctacgaggggctcaaggcctacctgatgttggcggacagcgagcactac gatccggacttcatcaaggcctggatcaccctggactgggagcggaccctggcccgcgac ctgcctcccgagcaacgccaggccctgaccggccacttgcaagcgctgttcgaaaagcat ccgcccaatgcgcgcctggaccagcgcctgatcgacgatctgcggcgccagttgcagcag ttgccggtggcccagcgggtctatgaccgggtcaagcgcgccaagctgccggacggtgtc ccggacttccgcctcagcgaagccggtggccgcgacgcggcgctggtgttcacccgcaag agcggcaagcccctgagcgaacccttgagcgggctgttcaccgtcaagggctaccgcgaa ggcttcctcctggccagcctcaaccaggccggcaccctggcggaagaacagtgggtgctg ggccgcgaccaggccgatcagcagaacgtcgccagccttgccgccgatgtgcgccgcctg tacttccaggactacctgcgccagtgggacgccttgctggcggacatcgattttgtgccg atcaccagcgtggcccaggccgcggacgtgctgcggattctctccgggcctacgtcgccg ctgaagaagctgctggtggccgtggccaaggaaaccgatctgcaacaggaagaacgcctg ttggcggcccagggccagaaggtcgagggcggtgtggatcagctcaagcagcgcctgggt tctctgctgggtcaggagcaggcgggcaacccggcggccgtggccagcagcgaagatccg gtgagcgcgcattttgccgatctcaacagcctggtgagcaagggtgagggcgagccggcg gccatcgacggcctgctggcggacatgaacgccctgtacgtgcaggtcagtgccatggtc ggggccagcggcgatgccctgctgggcgaggccaagaaccaggccagtgccgcggcggcg cgggtcagcctgaccgccgagcgtcagccgccggtggtccaggggctggtgaaatcggtg gtgggctccaccaccaacaccatgatgggcggggtgcgcaaccaattgaacgcggcctgg gtcagcgaggtggtgaacgtttatcgccagtccctgagcgggcgttatccgatgtctccg ggtagctcccgggacgcgaccctggaggatttcggccagttcttcggcaccggcggggtg atggacaactacttccgcaagtatttgcagccttacgtcaacacctcgaccccgacctgg agctggcagccgggcgcggcgcagaagctgggcatttcccccggcgtgctgcagaccttc cagcgcgcttcgaacatccgtgatgccttcttccgctccagcggcggtacccagccggcg gtgcgtttcgaactcaagccggtggccatggacgctaatatcagccagttcctcctcgac ctggatggccagcaactgagctacgaccacggtccgagccgcccggtggccatgcagtgg ccgaatccggggagcatcggcgtggtgcgcctgtcgatcatgccgccgtcggccactggg cgctccgggatcaccctggacggcccatgggcctggttccgcctgctggagcagtcggac ctgacggccaccaactcaccggaccgcttcaacctgcggctgcgggtggatggcgcgagc atttcctacgagctgcgggccagcagtgccttcaacccgttcaagagccgggtgctcagc ggcttcagcctgccggagcggctatga

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