Pseudomonas protegens Cab57: PPC_6039
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Entry
PPC_6039 CDS
T03613
Symbol
tssA
Name
(GenBank) type VI secretion protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_6039 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppro02044
]
PPC_6039 (tssA)
Secretion system [BR:
ppro02044
]
Type VI secretion system
Imp/Vas secretion system core components
PPC_6039 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
BAO65386
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All DBs
Position
6666535..6667542
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AA seq
335 aa
AA seq
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MLLAAVSATSPCGEDLEYDADFLHLERAAQGQPERSMGDSILPAEPPDWRSIQQQSLDLL
ARSKDLRITHFLLQSTLALEGLPGLATSLELIDGLLRDYWADLHPRLDADDDNDPTVRIN
ALAGLASDTTIGLLREAILTRSRTFGPVSLRAALNAAGLQHFSGESLGSDHLAGALQDSD
PEHLDAIRSALSAARSAAESIEKQVSEQVGSASGVDLTALKQPLRLALQVLGQHAPQGAQ
NAVEEHADGPSTEEPGAPAAPAPVRVSGEISSREDVLRSLDRLLAYYSRHEPSSPLPVLL
NRAKNLVNADFAAIVRNLIPDGMSQFENLRGPESD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcgccgcggtttcagcaacttcgccttgtggcgaagacctggaatatgacgcg
gatttcttgcacttggagcgggccgcacagggccagcccgagcgcagcatgggcgactcg
atcctgccggccgagccgccggactggcgcagcatccagcaacagagcctggacctgctg
gcgcgcagcaaagacctgcgcatcacccacttcctcctgcagagcaccctggccctcgaa
ggcctgccgggcctggccaccagcctcgaactgatcgacggcctgctccgggattactgg
gcggacctgcatccgcgcctggacgccgacgacgacaacgaccccacggtgcgtatcaac
gccctggccggcctggcgtccgacaccaccatcggcctgctccgcgaagccatcctgacc
cgttcccggaccttcggcccggtgagcctgcgagccgcgctgaacgccgccggcctgcag
cacttttccggcgagagcctgggctccgaccacctggccggcgccctgcaagacagcgac
cccgagcacctggatgccattcgcagcgccttgagcgcagcccgctcggcggccgaaagc
atcgagaaacaggtcagcgaacaagtaggctcggccagcggtgtagacctcacggccctc
aagcaacccctgcgcctggcgctgcaggtgctgggccagcacgccccgcaaggcgcgcag
aacgcggtcgaggaacacgccgatgggccgtccaccgaagagcccggtgcgcccgcagcg
ccagccccggtacgggtttccggcgagatcagcagccgcgaagacgtgctgcgcagcctt
gaccggctgctggcctactacagccgccacgagccttcgagcccgttgccggtgctgctc
aaccgggccaagaacctggtcaacgccgacttcgcggccatcgtgcgcaatctgattccc
gacggcatgtcccaatttgaaaacctgcgcggtcctgaatccgactaa
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