Pseudomonas protegens Cab57: PPC_6040
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Entry
PPC_6040 CDS
T03613
Symbol
tssB-2
Name
(GenBank) type VI secretion system
KO
K11901
type VI secretion system protein ImpB
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_6040 (tssB-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppro02044
]
PPC_6040 (tssB-2)
Secretion system [BR:
ppro02044
]
Type VI secretion system
Imp/Vas secretion system core components
PPC_6040 (tssB-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
BAO65387
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All DBs
Position
6667624..6668139
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AA seq
171 aa
AA seq
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MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPVEPLAAVADRK
FLEIDVDNFDSRLKAMQPRVAFHVPNELTGEGNLSLDITFESMDDFSPAAVARKVDSLNQ
LLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALASAPKPADSEPNA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcaaagttctcaaaagttcatcgcgcgcaaccgcgcgccccgggtgcagatc
gagtacgacgtcgaactctacggcgccgagaaaaaggtccagctgcccttcgtcatgggc
gtgatggccgacctcgccggcaagcccgtggagcccctggcggccgtggccgatcgcaag
ttcctggaaatcgacgtcgataacttcgactcgcgcctcaaggccatgcagcctcgggtg
gccttccacgtgcccaacgaactgaccggcgaaggcaacctgagcctggacatcaccttc
gagagcatggacgacttcagcccggcggccgtggcgcgcaaggtcgattcgttgaaccag
ttgctggaagcccgcacccagctggccaacctgctgacctacatggacggcaagaccggc
gccgaagaaatcatcatgaaagccatcaaggatccggcgttgctccaggccctggccagt
gcgccaaagcctgctgactccgagccgaacgcgtaa
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