Pseudomonas protegens Cab57: PPC_6080
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Entry
PPC_6080 CDS
T03613
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_6080
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_6080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_39
Motif
Other DBs
NCBI-ProteinID:
BAO65427
LinkDB
All DBs
Position
complement(6710426..6711364)
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AA seq
312 aa
AA seq
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MVRVREDVMNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLEAALGLTLVNR
SRTPVELTAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEVMQVAAAHSLALGFFPRWI
AQLRNEGLNIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDSEIFPSLHLGHTE
MLPVCAADAQGKPLFDLEGEASVPLLAYSAGAFLGRSVNLLLRQRNLRFTTVYETAMADS
LKSMALEGLGIAWVPQLSVRAELARGELVVCGGAQWHVPLEIRLYRCALVRKANVRLLWR
KLEGAAAQAAAT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgtccgggaggacgtgatgaatctggaaagcaaatggctcgaggacttcagt
gccctggccgccacccgcagcttttcccaggctgccgagcgacgtttcgtgacccagccg
gccttcagccggcggatccgcagcctggaagcggccctgggcctgaccctggtcaaccgc
tcgcgcacgccggtggagctgacggcagcggggcagttgttcctggtgaccgcgcgcacc
gtggtcgaacagctcggcgaggtggtgcgtcacctgcaccacctggaaggcgggcagggc
gaggtgatgcaggtggcggctgcccactccctggcgctgggcttcttcccacgctggatc
gcccaactgcgcaacgaagggctgaacatcgccacgcggctggtggccaccaacgtgggt
gatgcggtgcacgccctgcgcgaaggcggctgcgacctgatgctggccttctatgacccg
gacgcagccttgcagatggactcggaaatcttcccctcgctgcacctggggcacaccgag
atgctcccggtgtgcgccgccgatgcccagggcaagccgctgttcgacctggaaggcgag
gccagcgtgccgttgctggcgtacagcgccggggctttcctcgggcgttcggtgaacctg
ctgctgcgccagcgcaacctgcgtttcaccaccgtctatgaaaccgccatggccgacagc
ctcaagagcatggccctggaaggcctgggcattgcctgggtgccgcaactgagcgtgcgc
gccgagctggcccggggcgagctggtggtgtgcggcggggcgcaatggcatgtgccgctg
gagattcgcctgtaccgctgcgccctggtgcgcaaggccaacgtacgcttgctgtggcgc
aagctggaaggcgctgccgcgcaagctgcggccacgtag
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