Pseudomonas protegens Cab57: PPC_6112
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Entry
PPC_6112 CDS
T03613
Name
(GenBank) LysR family transcriptional regulator
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_6112
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_6112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
BAO65459
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Position
6746888..6747823
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AA seq
311 aa
AA seq
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MRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTEAAE
ALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAIESSAKYFVPHLFAAFKRQHPEVHLQ
LTVVNRSQVIRRLSDNRDDLVIMSMVPQDMELEFLPFLNNPIVAVAPPEHPLSHMGPLRL
QDLEPYTLVLREQGSGTRLACEEYFKEKRVHFTQILEVSSAEAQRECVRAGLGVALLTRH
ALNLELATGGLVELPVEELPLLRSWCLVQAKAKRLSPVAHAFLGFIRSERVQISGLVERF
DGKLRAPPASN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtcagttgcagattttcaatgaagtctgcgatctacgctcctacagccgcgccgcc
gatgaaatgtccctcacccagcccgcggtcagcctgcagattcgccagttggaggagctg
atcggccagcctctgttcgactatgtgggcaagaagctctacatgaccgaagccgccgaa
gcgctgcaacgggccagccgggacatcttcgggcgcctggagaacctcgacatgcagctc
tccgacatgcagggttcgctgcagggccagctcaagctggccatcgaatccagcgccaag
tacttcgtgccgcacctgttcgccgccttcaagcgccagcacccggaagtgcacctgcaa
ctgacggtggtcaaccgctcccaggtgatccgccggctctcggacaatcgcgatgacctg
gtgatcatgtccatggtgccccaggacatggagctggagttcctgcccttcctcaacaac
ccgatcgtcgcggtggccccgccggagcaccccctgagccacatgggcccgctgcgcctg
caggacctggagccctacacgctggtactgcgcgaacagggttcaggcacacgcctggcg
tgcgaggagtatttcaaggagaagcgcgtgcacttcacccagatcctcgaagtatcgtcg
gccgaggctcagcgcgagtgcgtgcgggcaggtctgggcgtggccttgttgacgcgccac
gccctgaaccttgagttggcgaccggcgggttggtcgagttgccggtcgaagagctgcca
ttgctgcgcagctggtgcctggtgcaggccaaagccaagcgcctgtcaccggtagcgcat
gcgttcctgggattcatccgcagcgaacgggtgcagatcagcggcttggttgaacgcttc
gacgggaagctgcgggcgccgcctgccagtaattga
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