Pseudomonas protegens Cab57: PPC_6115
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Entry
PPC_6115 CDS
T03613
Name
(GenBank) sensory box/GGDEF domain/EAL domain-containing protein
Organism
ppro
Pseudomonas protegens Cab57
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS
PAS_4
PAS_8
DUF2070
PAS_PdeA
DUF7525
PUMA_CC
MASE5
Phage_min_cap2
PAS_7
Motif
Other DBs
NCBI-ProteinID:
BAO65462
LinkDB
All DBs
Position
complement(6749197..6752061)
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AA seq
954 aa
AA seq
DB search
MTLNPDLSGPFVEPRVIRQHYAVEMAVERTRLLYQGSLLPTLFMLLNGLVCTWLLWSPAR
YLLLSVWMVWLLALVALRVIQVAAFDSAIPSRQAQPVWQRMFLLGSAVSGLTLACAGIAL
VPTDNFLQQAWVFGLIGAAILSASVAYAVSLQAFLSFTLPCLLPAIAYLFWGGDDQQRGW
GWLGLILLVSLSVVAWQVNRLMQRGLLRRFQNQALIEHLQNAQGRSDQLNRELAREVEQR
RRAEEQLREAQTGLEQRVAQRSLELDAANQALSKSEARLALALNASELGLWDWNLQTDEV
HHTQIKELFGLEPEDVTAMLSHLKPRLHPEDLPLLKRALVEHLKGRSDDYQVEYRVRHGA
GHWVWIEDRGRAVERSPSGRVLRMAGTRRDISADKELEVQRNLAATVFEAASEGIVILDP
DYALIAANQAFSQVTGYQIEDMLGRNVVELSCSRDARRHYPLIHQALEQYGSWQGELVET
RKNGELYPQWLQLNVVRDKRGKVRHIVGFFADLSARRESEERMRYLTHYDELTGLANRSL
FRERLREAHQRVRQGGRSLALLHINLDRFKLLNDSLGHEVADQLLQKMARRLVNALPEAD
TIARLSGDEFAVLFDAYGSLSSLTRVATRLLSKLRLPITVEGHELVVSASMGISMLPDSA
REIAALISQANMAMAHAKHLGGNNFQFYTESLQASTLERLQLENQLRKAIEEGQLTVFYQ
PKLCLASGRLNAAEALVRWDHPVMGRVPPGDFIGLAEETGLIGPIGEFVLRQACRQACEW
QRQGLEPIRVSVNLSVYQLRQGKLVSLVRQVLEETGLEPHFLELELTESQLLDSVEHIIA
TFQQLRGLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLAEGGEDAAITRAIIA
MAHGLSLKVVAEGVEDPAQLAFLKAEHCDEVQGYLISRPVAAEGLALLLQAQSR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacacttaaccccgacctgtccgggccctttgtggagccccgggtcatccgccagcac
tacgccgtggagatggcagtggagcgtacgcgcctgctgtaccagggctcgttgctgccg
accttgttcatgttgctcaacggcctggtgtgcacctggctgctatggagcccggcgcgc
tatctgttgctcagtgtgtggatggtctggctgctggccctggtggccttgcgggtgatc
caggtggcggccttcgattcggcgattcccagccgccaggcacagccggtgtggcaacgc
atgtttctcctgggctcggcggtcagtggcctgaccctggcctgcgccggcatcgccctg
gtgcccaccgacaatttcctgcagcaggcctgggtcttcggcctcatcggtgcggccatc
ctctccgccagcgtagcctacgcggtgagcctgcaggccttcctttcattcaccttgcca
tgtctgttgccggccatcgcctacctgttctggggcggcgacgaccagcagcgtggctgg
ggctggctcgggctgatcctgctggtgtcgctgagtgtggtggcctggcaggtcaaccgc
ctgatgcagcgcggcctgctgcggcgctttcagaaccaggccctgatcgagcacctgcag
aatgcccagggccgcagcgatcagctcaaccgcgagctggcccgggaagtggagcagcgc
cgccgtgccgaggagcaactgcgcgaagcccagaccgggctggaacagcgagtggcccag
cgcagcctggagctggacgccgccaaccaggccctgagcaagagcgaggcgcgcctggcc
ctggccctgaacgccagcgagctggggctgtgggactggaacttgcagaccgacgaggta
catcacacccagatcaaggagctgttcggcctggagccggaagatgtcacggccatgctc
agccatctcaagccacgcctgcatccggaagacctgcccttgctcaagcgcgccctggtg
gagcacctcaagggccgcagcgacgattaccaggtggagtaccgggtacgccacggcgcc
ggccactgggtgtggatcgaggaccgtggccgggccgtggagcgcagccccagtggccgg
gtgctgcgcatggccggcacccgtcgcgacatcagtgccgacaaggagctggaggtccag
cgcaacctggcggccacggtgttcgaggcggccagcgaaggcatcgtcatcctcgacccc
gattacgccttgatcgccgccaatcaggccttcagccaggtcaccggctaccagatcgaa
gacatgctcgggcgcaatgtagtggagctgtcgtgcagccgcgatgcgcgccggcactac
ccgttgatccaccaggccctggaacagtacggcagctggcagggcgagttggtggagaca
cgcaagaacggcgagctctacccacaatggctgcaattgaatgtagtgcgtgataaacga
ggaaaagtccggcatatcgtgggcttcttcgccgatctttcggcacggcgcgaatccgag
gagcgcatgcgctacctcacccattacgacgaactcacggggctggccaaccgttcgctg
ttccgcgagcgcctgcgcgaggcccatcagcgggtgcgccagggcggccgcagcctggcc
ttgctgcacatcaacctggaccgtttcaagctgctcaacgacagccttggccatgaagtg
gccgaccagctgctgcaaaagatggcccggcggctggtcaatgccttgccggaagccgac
accatcgcccggctttccggggacgaattcgccgtgctgttcgacgcttacggcagcctg
tcgagcctgacccgggtcgctacccggctgctgagcaagctgcgcctgccgatcaccgtc
gagggccatgaactggtagtcagcgcttccatgggcatcagtatgctgcccgacagcgcc
cgggagatcgcagccctgatcagccaggcgaacatggccatggcccatgccaagcacctg
ggcggcaacaatttccagttctataccgagagcctgcaagccagcaccctggagcgcctg
cagctggaaaaccagctgcgcaaggccattgaggagggccagttgacggtcttctaccaa
cccaagctgtgcctggccagcggccgtctgaatgccgccgaggccctggtgcgctgggat
caccccgtcatgggccgggtgcccccgggagatttcatcggcctggcggaagagaccgga
ttgatcggccccattggcgagttcgtgttgcgccaggcgtgccgccaagcctgcgaatgg
caacgccagggcctggagccgattcgcgtgtcggtcaacctgtcggtgtatcagttgcgc
cagggcaagctggtgagcctggtgcgccaggtgctggaagaaacaggcctggagccgcat
tttctcgaactggaactgaccgaaagccaactgctggacagcgtcgagcacatcatcgcg
accttccagcaactgcggggcctgggggtcaagctggccatcgacgacttcggcactggc
tattcgtccctgagttacctgaaacggatcccggtggattacgtgaagatcgaccaggcc
ttcattcgcggcctggccgagggcggtgaggatgcggcgatcacccgggcgatcatcgcc
atggctcatgggctgtcgttgaaagtggtggccgaaggggtggaagaccccgcgcaactg
gccttcctcaaggcggaacactgcgacgaggtgcagggctacctgatcagccgcccggtg
gccgccgaaggcctcgcgctgctgttgcaggcccagagccggtag
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