Pseudomonas protegens Cab57: PPC_6184
Help
Entry
PPC_6184 CDS
T03613
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_6184 (trmE)
Transfer RNA biogenesis [BR:
ppro03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PPC_6184 (trmE)
Prokaryotic type
Methyltransferases
PPC_6184 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
Roc
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAO65531
LinkDB
All DBs
Position
complement(6823482..6824852)
Genome browser
AA seq
456 aa
AA seq
DB search
MNVPRETIAAIATAQGRGGVGIVRISGPLAGAAAKAISGRELKPRFAHYGPFLSEQEEVL
DEGIALYFPGPNSFTGEDVLELQGHGGPIVLDMLLQRCLELGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSAQAARNALRSLQGAFSQRVHNLTEQLIALRIYVEAAIDFPEEE
IDFLADGHVLSMLDAVRDELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTEDQVEKIGVERALKAISEADRVL
LVVDATAAEAADPFALWPEFLEQRPDPAKVTLIRNKADLTGEPIALETCDDGHVTISLSA
MAAGSGLELLRDHLKACMGYEQTSESSFSARRRHLEALRYASAALEHGRAQLTLAGAGEL
LAEDLRQAQQSLGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccctcgtgaaaccatcgctgccattgctaccgcccagggccgcggcggcgtg
ggtatcgtacggatttccgggcccctggcgggcgcggcagccaaagccatcagcggtcgt
gagctgaagccgcggtttgcccattacgggccgtttctcagtgagcaagaagaagttctg
gatgagggcattgccctgtatttccccgggccgaactccttcacaggcgaagacgtgctg
gaactgcagggccacggcggcccgattgttctcgacatgctgctgcagcgctgcctcgaa
ctgggctgccgcctggctcggccgggggaattcagcgagcgtgcgttcctcaacgacaaa
ctggacctggcccaggccgaagccattgccgacctgatcgaggccagttcggcacaggct
gcgcgcaatgccctgcgttcgttgcaaggggcgttctcccagcgtgtgcataacttgacc
gagcaactgatcgccctgcggatctatgtcgaagcggcgatcgattttcccgaggaagaa
atcgacttccttgccgatggccatgtgttgagcatgctcgatgcagtgcgtgacgagtta
tccacagtactgcgtgaagccgggcagggcgccctgctgcgcgatggcatgaccgtggtg
atcgccgggcgcccaaatgccggcaaatccagcctgctcaacgccctggccgggcgcgaa
gctgccatcgtcaccgatatcgccggcaccactcgggacatcctgcgcgaacatatccac
atcgacggtatgccgttgcacgtggtggacaccgcaggtctgcgggacaccgaggaccaa
gtggaaaagatcggtgtcgaacgggccctcaaggccatcagcgaggccgaccgggtgttg
ctggtggtggacgccaccgcggcggaagcagcggaccccttcgccctgtggccggagttt
ctcgaacagcgaccagacccggccaaggtcacgctgattcgcaacaaggccgatctgacc
ggtgaacccattgccctggaaacctgtgacgatggccatgtcaccatcagcctcagtgcc
atggccgcgggtagcgggctggaactgctgcgtgaccacctgaaagcctgcatgggctat
gaacagacgtccgaaagcagcttcagtgcgcgccgccggcacttggaggcattgcgctac
gccagtgccgccctggaacatggccgggcacagttgaccctggcaggtgccggcgaactg
ctggccgaggacttgcgccaggcccagcaatcgctgggggaaatcaccggggccttcagt
tccgatgacctgctggggcggatcttctccagcttttgcatcggcaagtaa
DBGET
integrated database retrieval system
