Paenibacillus protaetiae: ET464_00380
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Entry
ET464_00380 CDS
T06829
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pprt
Paenibacillus protaetiae
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprt03400
]
ET464_00380
DNA repair and recombination proteins [BR:
pprt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ET464_00380
Archaeal homologous recombinant proteins
ET464_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
CCDC22_CC
AAA_15
nSTAND3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QAY65071
UniProt:
A0A4V0YEQ9
LinkDB
All DBs
Position
93539..96631
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLTMTAFGPYRDTETVDFSELGGQRLFVISGNTGAGKTSIFDAICFALYGSASGED
RAEPRMLRSHFADDDTHTSVDFEFAVGTRSFRIFRQLPHRKGNNKSETGGKAELYELTSG
QEIPAVDRFMINDVNAKLETIIGLTKDQFSQIVMLPQGEFRKLLTSDTDNKEEILRRIFR
TELYQRLEGRFQKKSRDLNDSLKEAKLRADMVMQQAQDSLPVREGSGLHRTFAQEVYNAS
QVAEGLEQEEAYYKAEAGKAEARKAELAEALNGQEKRLREAETLNARFAELARERARLAE
LERQGADYDSGEQRLRLAERAALLVPYAEQARRSAGDEAAKRAASADRRRHAEQAAQRLE
QAMDRFREEEQRETERADAERKLQKLAELAPAVASIGELRRDAERLAREEQALAAQLREA
ESGLAATREQRQQTVARVRLIEEAVALLPDKREQMRELEQLGKQVSELLKLEQALAAYEA
MEAERAAGLGKLRAEHDKLELAWIEGQAGLLAAHLHDGEACPVCGSMEHPAKAAVSERLP
SREELQEAKAKLAHVESELQAAKSQAAVARETWHRGAEELTRFGVAADDLTARQAQLRQQ
YKQLRDETAVMQQQQAELQQLKEAAARLEQQQDRQQLVKDQLQLSCQQAAVERSSKQLLL
EKELERIPEAYRSPERVHAALAEARRHAEALAAAWKQAQEQRQAAQVAAAESAAYAAQAE
QQLAEAETAAREAAERLQAELAAAGFADAAAFEGAVMEPAAREALRKRIQDYRASVKAAA
ERAAALERELAGLEPADTGKLQAELAEAKQSLEAAAEELQQAVRFGQEAARLCGALQGAQ
KRVKELEGQLEQVLDLFQMLKGDNAIKMSFERYILTEYLEQILHAANIRLRELSNGQFML
LRSDRLETRGKQSGLGLDVYDAYTGQNRDVKSLSGGEKFGASLSLALGMTDVIQAAQGGV
SIEMMLIDEGFGSLDEEALNKAITALVDLQRSGRMIGVISHVQELKQAFPACLEVRKTKE
GHSRTAFVLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccgttaaagctgaccatgacagcattcgggccgtaccgggatacggagacggtt
gatttcagcgagctgggcgggcagcgcctgtttgtcatttcaggcaataccggcgcaggc
aaaacatccatttttgatgcgatctgctttgctttgtacggctcggcaagcggcgaggac
cgcgcagagccgcggatgctgcggagccattttgccgatgacgatacccatacgtcggtt
gatttcgagtttgcggtcggtacgcggtcgtttcgtattttccgccagctgccgcaccgc
aaagggaacaacaaaagcgaaaccggcggcaaagccgaactgtacgagctgacctccggg
caggaaattccggccgtcgaccggtttatgatcaacgatgtcaatgccaagctggagact
attatcgggctgacgaaagaccaattcagccaaattgtcatgctgccgcaaggcgagttc
cggaagctgcttacatcggacacggacaataaggaagaaatattaaggcggattttccgc
acggagctgtatcagaggctggaagggcgcttccagaaaaaaagccgcgatttaaacgat
tcgctgaaggaagcaaagctgcgggctgatatggtgatgcaacaagcgcaggacagcttg
ccggtacgagaaggcagcgggctgcaccggacgtttgcgcaggaggtttacaatgcgtcg
caggttgcagaagggctggaacaggaagaagcttattataaagcggaagcgggcaaagcc
gaagcgcgcaaggcggagcttgccgaagcgctgaacgggcaagaaaagcggctgcgcgaa
gcggagacgcttaacgccagattcgccgaactcgcccgcgagagggcaaggcttgccgaa
ctggagcggcaaggcgccgattacgacagcggcgagcagcggctccggctggcggagcgg
gcagctctgcttgtgccatatgccgagcaggcgcgccggtccgcaggcgacgaggccgcc
aagcgtgcggccagcgcggatcgccgccgccatgcggagcaagcggcgcagcggctggag
caggccatggatcggttccgcgaagaagagcagcgcgagacggaacgtgcggatgcggaa
cggaagctgcagaagcttgccgaacttgcgcctgcggttgcttccatcggcgagctgcgc
cgcgatgcggagcggcttgcccgcgaggagcaggcgcttgccgcgcagcttcgcgaagcg
gaaagcgggcttgctgcgacccgcgaacagcggcagcaaacggtggcgcgcgtacgtctg
atcgaagaagccgttgcgctgctgccggacaagcgggagcagatgcgggagctggaacag
cttggcaagcaggtaagcgagctgctgaagctggagcaggcgctggccgcttacgaggcg
atggaagcggagcgggcagccggacttggcaagctgcgcgccgagcatgacaagctggag
ctggcgtggattgaagggcaggcgggtttgctggccgcccatctgcatgacggcgaagct
tgtcccgtatgcggcagtatggagcacccggccaaagcggctgtatcggagcggctgcct
tcacgcgaggaactgcaggaggcgaaagcaaagctggcccatgtggaaagcgagctgcag
gccgccaaatcgcaagcggcggttgcccgtgaaacctggcatcgcggagcggaggagctg
acacggtttggagtggcggcggatgatcttaccgcccgccaggcgcagctccgccagcaa
tataagcagctgcgcgatgaaacggcggttatgcagcagcagcaagccgagctgcagcag
ctgaaggaagcggccgcccggcttgagcagcagcaggaccggcagcagctggtgaaggac
cagctgcagctgagctgccagcaggcggcggtcgagcgaagctcgaagcagctgctgctg
gagaaagagctggagcggattccggaggcataccgctcgccggagcgtgtgcacgccgcg
ctggcggaagcgcggcgtcatgccgaggcgcttgccgcagcctggaagcaggcgcaggag
cagcggcaggcggcgcaggtggcggcagcggaaagcgccgcctatgctgcgcaagcggag
cagcagcttgcggaagcggaaacggccgcccgcgaggcggcggagcggctgcaggcggag
ctggcagccgcaggttttgccgatgcggccgcgttcgagggcgcggttatggagccggct
gcgcgcgaagcgctgcgcaaacggatccaggactaccgcgcgtccgtgaaagccgccgcc
gagcgtgcggcggcgctggagcgggagctggccggcctggaaccggccgatacgggtaag
ctgcaggcggagctggcggaagcgaagcaaagcctggaagcggctgccgaagagctgcag
caggctgtccgtttcggacaggaggccgcccgcctttgcggcgctttgcagggtgcgcag
aagcgggtgaaggagctggagggccagctggagcaggtgctggacctgttccaaatgctg
aagggcgataacgccatcaaaatgtcgttcgaaaggtatatcctcaccgaatatttggaa
caaattttacatgcggccaatatccgcctgcgggagctttccaacgggcagttcatgctg
ctgcgcagcgaccgtctggaaacaaggggcaagcaaagcgggcttggtcttgatgtatac
gacgcgtataccggccaaaaccgggacgtcaaatcgttgtccggcggcgaaaaattcggc
gcctcgcttagccttgcgcttggcatgacggatgtgatccaagcggctcaaggcggcgtt
tcgatcgaaatgatgttgattgacgaaggatttggctctttggacgaagaagcgctgaat
aaagcgataaccgcattggtggacttgcagcgcagcggcagaatgattggcgttatttcc
cacgtgcaggagctgaagcaagcattcccggcatgcctggaagtgcgcaaaaccaaagaa
gggcacagccgcactgcgtttgtgctgaaataa
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