Paenibacillus protaetiae: ET464_01095
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Entry
ET464_01095 CDS
T06829
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03410
Base excision repair
pprt03430
Mismatch repair
pprt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ET464_01095 (recJ)
03430 Mismatch repair
ET464_01095 (recJ)
03440 Homologous recombination
ET464_01095 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprt03400
]
ET464_01095 (recJ)
DNA repair and recombination proteins [BR:
pprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ET464_01095 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ET464_01095 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ET464_01095 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Usp
Motif
Other DBs
NCBI-ProteinID:
QAY65189
UniProt:
A0A4P6EU74
LinkDB
All DBs
Position
256112..257704
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AA seq
530 aa
AA seq
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MDPIEARQQRGVEHSVIKQKTRWTITPWSEQEEQQAGLLAETLRLSPLVARLLVRRGCSD
PAVAERFLFAGPQHLHDPFLLKGMKEAAERIHSAGETGEKIRIYGDYDADGVSSTSLLVY
LFRELGYDYDYYIPHRMLEGYGLNRKALELAAEDGVKLIVTVDTGISAFEEIEYAKELGL
DVVVTDHHEPPERIPDAVAVVNPKQHDCPYPFKGLAGVGVAFKLAHALLGSAPLQWADIV
CLGTIADLMPLTDENRILVREGLALLQTMEKPGFRALAEVSGIEQGQVTATSVGFGIAPR
INAAGRLDHARRAVELLISPSYDEAILTASALDLLNKERQRLVEGIVKEAEEQWASKAAH
AEAEGVPVPSVIVLAGEGWNVGIIGIVASKLLERHYKPTIIFGIDPDTGMAKGSARSIDG
FDLHAALTECEALLDHYGGHQAAAGMSLHRDNLPALEQQMSGLADRWLTADDWIPKTSID
LICGVEEATLQTISQLSQLEPFGNANPSRGFYSAGQRLATAGQSARTTNI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
attgatccaatagaagctaggcagcagagaggggttgaacacagcgtgatcaaacaaaaa
acgcgctggaccataacgccctggagtgaacaagaagagcagcaggccggccttttagcc
gagacgcttcgtttgtcgccgcttgttgcgagattgctcgtcaggcgcggctgcagcgat
ccggctgtcgctgaacgttttttattcgccgggccgcagcatttgcatgatccttttttg
ttaaaaggaatgaaagaagctgccgagcgaatccacagcgcaggggaaaccggagaaaaa
atccggatatacggcgattatgacgcagacggcgtttcaagcacttcgcttcttgtctat
ttatttcgcgaacttggttatgattatgattattatatcccgcatcgtatgctcgaaggt
tacggcttgaaccgcaaggcgctggaactggcggcggaagacggcgtcaagctgatcgtt
acggtagataccggcataagcgcattcgaggagattgaatatgcaaaagagttgggtctc
gatgtggtggtcaccgaccatcatgaaccgcctgagcgaattccggatgccgttgcggtt
gttaacccgaagcagcatgactgcccttatccgtttaaaggcttggccggcgtaggcgta
gcgttcaagctggcgcatgcgctgttaggctcagcgccgctgcagtgggcagatattgtg
tgcctcggcacgattgccgacttaatgccgcttacggatgaaaaccgcattcttgtgcgt
gaagggcttgcgctgctgcagacgatggaaaaacccggattcagagcgcttgcggaagtg
tccggcattgagcaggggcaggtaaccgcaacatcggtcggtttcggcattgcaccgcgc
attaatgcagccggccggctggatcatgccagaagggcggtggagctgcttatatcgcct
tcttatgacgaagcgatattaaccgcttctgcacttgatttgctgaataaagagcggcag
cggctggtggagggtatcgtcaaggaagcggaagaacagtgggcttccaaggcggcacat
gcggaagcggaaggcgtgcccgtcccatccgtcattgtgctcgccggcgaaggctggaat
gtgggcattatcggcatcgtcgcctccaagctgctagagcgccattataagccaaccatt
attttcggcattgacccggataccggcatggccaaaggttcggccagatcgattgacggc
tttgatctgcatgccgcacttacggaatgcgaagcgctgctggatcattacggcggccat
caggctgcagccgggatgagcttgcatcgcgacaatcttcctgccttggagcagcagatg
agcggcctggcggaccgatggctgacggcggatgactggataccgaaaacgtccatcgat
ttgatatgcggcgttgaggaagcgacactgcaaacgatcagccagcttagccagctggag
ccgtttggcaacgccaatccttcccgcggcttttattccgccgggcaaagattggcgacc
gccgggcaatcggcaaggacaacaaacatttga
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