Paenibacillus protaetiae: ET464_08155
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Entry
ET464_08155 CDS
T06829
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET464_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprt03019
]
ET464_08155
03009 Ribosome biogenesis [BR:
pprt03009
]
ET464_08155
Enzymes [BR:
pprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ET464_08155
Messenger RNA biogenesis [BR:
pprt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET464_08155
Ribosome biogenesis [BR:
pprt03009
]
Prokaryotic type
rRNA helicases
ET464_08155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
Cas3-like_C_2
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QAY66387
UniProt:
A0A4P6F071
LinkDB
All DBs
Position
1789078..1790907
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AA seq
609 aa
AA seq
DB search
MSSAFTTLGVHTELAQFLRNNGITEPTPVQTQTIPLLLQGQDVIAQAQTGTGKTVAFIVP
ILQQINTQKDQVQALILTPTRELAIQITGELKKLAPAVGASVLAAYGGQDVEAQIRKLNN
APHIIVATPGRLLDHMRRETVNLGKLKMLVLDEADQMLHMGFLPEVETIVSQTPKARQTM
LFSATMPDAIKRLAGEYMKSPADIRIKTAHVTLDNIKQLVLETTDRAKQGALIRLIEQHR
PYLAVVFCRTKIRAKKLNEALQDYGIASDELHGDLTQAKREQVMKRFRDAKLQVLIATDV
AARGLDVEGVTHVFNYDVPQDSEIYIHRIGRTGRAGQSGTAITLATPRDRGTVQLIERNI
NASLERRRLEADGAIVRVDRAQETAGGRSQRGSSGRGNTSRAGGRGKQRGNARGFGDAAG
SSRAGGDSRGKQRGNARGFGDAAGSSRADGDSRGKQRGNARGFGDTAGSSRAGGDSRGKQ
RGNARGFGDAAGSSRAGGDSRGKQYGNARGFGDAAGSSRAGGDSRGKQRGNARGFGDAAG
SSRAGGDSRGKRGANSSAPSGPRSWATGQQPAGAAQSSGRKPAAGGRNGGRSGGSGRGAA
GRPGGRRGK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgcatttacaacgcttggagttcatacggaactggcacagttccttcgaaat
aacggcattacggagccgactcccgtccaaacccaaacaatccccctccttctgcaaggg
caagacgtcattgcccaggcacaaaccgggacgggtaaaacggttgcttttatcgtgccg
atcctgcagcaaatcaacacgcaaaaagatcaggttcaagcactgatattgaccccgacg
cgtgaacttgccattcaaattaccggagagctgaaaaaacttgctcctgctgttggcgct
tccgtacttgccgcttacggcggccaggatgtggaggcgcaaattcgcaagctgaacaac
gcccctcatattatagtagcaactccaggaagactgctggaccatatgcgccgcgaaacg
gtcaatttgggcaagctgaaaatgcttgttttggacgaagcggatcaaatgcttcatatg
ggatttttgcccgaggttgaaacaatcgtgtctcagacgccgaaagcgcgtcaaacgatg
ctgttctctgccacaatgccggatgccatcaaacgtctcgccggcgaatatatgaaatcg
cctgccgatattcggatcaaaaccgcacatgtgacgctggacaatataaagcagcttgtt
ctcgaaacaacagaccgggccaagcaaggcgctctcatccggcttatcgagcagcaccgg
ccgtatttggcagtcgtattttgcagaaccaaaatccgcgccaaaaagctgaatgaagcg
ctgcaggactacggcatcgcctcggacgaactgcatggcgacctgacgcaagcgaaacgc
gagcaagtgatgaaacggttccgcgatgccaaacttcaagtgcttatcgcgactgacgtt
gcagcacgcggacttgacgtagaaggcgttacgcatgtatttaactatgacgtcccgcaa
gacagcgaaatctatattcaccggatcggccgcaccggccgcgccgggcaatccgggaca
gcgattacactggcaacgcctcgcgatcgcggcactgtgcaattgatcgagcggaacatt
aacgcgagcctggaacgccgccggctggaagcggacggcgccatcgtgcgtgtagaccgc
gcgcaagaaacagctggcggccgttcgcagcgcggcagcagcggacgcgggaacacttcg
cgcgctggcggacgcggcaagcagcgcggcaacgcccgcggattcggcgacgcggcgggt
tcttcacgcgctggcggcgacagccgcggcaaacagcgcggcaacgcccgcggattcggc
gacgcggcgggttcttcgcgcgctgacggcgacagccgcggcaaacagcgcggcaacgcc
cgcggattcggcgacacggcgggttcttcgcgcgctggcggcgacagccgcggcaagcag
cgcggcaacgcccgcggattcggcgatgcggcgggttcttcgcgcgctggcggcgacagc
cgcggcaagcagtacggcaacgcccgcggattcggcgacgcggcgggttcttcgcgcgct
ggcggcgacagccgcggcaagcagcgcggcaacgcccgcggattcggcgatgcggcgggt
tcttcgcgcgctggcggcgacagccgcggcaaacgcggggcaaattcgtcagcgccaagc
ggaccgcgcagctgggcgaccggacagcagccggcaggcgcagcccaaagcagcggccgg
aaaccggcggccggcggccgaaacggcggacgttccggcggcagcgggcgcggagccgct
gggagaccaggcggccggcgcggcaaataa
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