Paenibacillus protaetiae: ET464_08285
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Entry
ET464_08285 CDS
T06829
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET464_08285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprt03019
]
ET464_08285
03009 Ribosome biogenesis [BR:
pprt03009
]
ET464_08285
Enzymes [BR:
pprt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ET464_08285
Messenger RNA biogenesis [BR:
pprt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET464_08285
Ribosome biogenesis [BR:
pprt03009
]
Prokaryotic type
rRNA helicases
ET464_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAY66408
UniProt:
A0A4P6F7K2
LinkDB
All DBs
Position
complement(1818624..1820192)
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AA seq
522 aa
AA seq
DB search
MKTFAEFGLEPKVLQAITELGFEESTPIQDKSIPIALTGSDLIGQAQTGTGKTAAFGIPL
INKIPVTEDRIVALIMTPTRELAIQVAEEIGKLTKFKGLRSLPIYGGQEIGRQIRALKKR
PQIIIGTPGRLLDHINRKTIRLDDVHTVVLDEADEMLDMGFMDDIQSILSMVPEERQTML
FSATMPPNIQKLAQQFLKNPEHVSVIPKQVSAPTIAQSYVEVHERQKFDALSRLLDMESP
ELAIIFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGAAYSFVTPREIDHLHFIEKVTR
HKITRKPLPSIAEAIEGKQRVTAEKILETIQDDSFNEYKGIAIQLLEQYDSVHLLAAAIK
LLTGEKKDITIELTPEDPIRAKKRRPDVRSNGRRFNGSSYGGNRSGSGSGGGYRGRDDRR
GGSSYRSGEGKSRDGYKSRENREGRSGERRPSKPSGSDFANN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttgctgaatttggcctggaacctaaagtgttgcaggcaattacggagctc
ggtttcgaggaatcgacccctatccaagacaaatccataccaatagcgctgacagggagc
gacctcattggtcaagctcagacaggtacaggaaaaacggctgcattcggtattccgtta
attaacaaaatccccgttacagaagatcgtatcgttgcgctcattatgacgccgacacgc
gagcttgctatccaagtagccgaggaaattggtaaactgacgaaatttaaaggacttcgt
tccttgccgatttacggcggtcaagaaatcgggcgccaaatccgcgcgttgaaaaaaaga
ccgcaaatcattatcggtacaccgggacgattgcttgaccatattaaccgcaaaacgatc
cgtctggatgatgtgcatacggtcgttctcgacgaagcggacgaaatgctcgatatgggc
ttcatggacgacattcagtcgattctcagcatggtgccggaagaacgccaaacgatgttg
ttctcggctacgatgccgccaaacatccagaagcttgcacaacagtttctgaaaaatccg
gaacatgtatcggtaattccgaagcaagtaagtgcgccaaccattgcgcaatcgtatgtt
gaagtgcatgagcgtcaaaaatttgatgccctcagccgtttgctcgacatggaatcgcct
gagctggcgattattttcggccgtacgaaacgccgcgtcgacgaactgagcgaagcgctg
caaaaacgcggttattccgcagacggcctgcatggcgacttgtcccaaaaccaacgcgac
aacgtaatgcgcaaattccgcgacggcagcattgatgtacttgttgcaacagacgtagcg
gcacgcggcctggacgtttccggcgttacgcacgtaattaacttcgacttaccgcaagat
ccggaaagttatgtacaccgtatcggccgtacgggccgtgccggtaaagaaggtgcagct
tattcgttcgtgacgcctcgcgaaatcgaccacctgcattttattgagaaagtaacgcgc
cacaaaattacgcgcaaaccgctgccaagcatcgcggaagcgattgaaggcaaacagcgc
gtaacggctgagaaaattttggagacgatccaagacgacagctttaatgaatataaaggc
atcgcgatccaattgcttgagcaatacgattccgttcatctgcttgccgcagcgatcaag
ctgcttaccggcgagaagaaggacattacgatcgagcttacgcctgaagatccgatccgt
gcgaaaaaacgcagaccggatgtccgctcgaacggccgccgctttaacggcagctcttac
ggcggcaaccgcagcggcagtggcagcggcggcggataccgcggccgtgacgaccgtcgc
ggcggcagcagctaccgcagcggggaaggcaaaagccgcgacggctacaaaagccgcgaa
aaccgtgaaggacgcagcggcgaacgccgtccaagcaagccgtccggcagcgatttcgcg
aataactaa
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