Paenibacillus protaetiae: ET464_17265
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Entry
ET464_17265 CDS
T06829
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ET464_17265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprt03021
]
ET464_17265
03400 DNA repair and recombination proteins [BR:
pprt03400
]
ET464_17265
Enzymes [BR:
pprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ET464_17265
Transcription machinery [BR:
pprt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ET464_17265
DNA repair and recombination proteins [BR:
pprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ET464_17265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QAY67884
UniProt:
A0A4P6EXT1
LinkDB
All DBs
Position
3734229..3735173
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELNEEGTYGRFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVIEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGEGNVTAGDIRADSDVEI
LSPDLHIATLASGARLHMRVFANRGRGYVQADRNKKEDQPIGVIPVDSIYTPITRVNYSV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLDLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagatcgaaaagccgaaaatcgagaccgtagaattgaacgaagaaggaacatac
ggacgtttcgttgtagaaccgttggaacgcggatatggcacaacgctcggaaactcgctt
cgtcgcattctgttgtcgtctctgccgggcgcggcagtgacatctgtacagatcgatgga
gttcttcatgagttctctacggttccgggagtgatcgaggacgtaacagagatcattctt
aacctgaaaggcctctcgttgaaaatccattccgatgaagaaaaggtgctggaaattgac
gcggagggcgaagggaacgttacggcgggcgatattcgagccgacagcgatgtcgagatt
ttaagccctgatcttcacatcgcaaccttggcctccggcgcgcggctccatatgcgggtt
ttcgccaatcgtggtcgcggttacgtgcaagcggaccgcaacaagaaagaagaccagccg
attggtgttattcctgtagattcgatttacacgccaattacacgtgtcaactatagcgtt
gaaaatacccgtgtgggtcaagtgaccaactacgacaagctgacgcttgaagtatggaca
gacggcagtattagaccggaagaggctgtaagcctcggcgctaaaattttgaccgagcat
ttggacctgttcgttggattgaccgatgaagccaaagacgcggaaattatggtcgagaag
gaagaagataagaaagagaaagttctggagatgacaatcgaagaactggatctttccgta
cgttcttacaactgtttgaaacgtgcaggcatcaacactgtgcaagagctgattacgaaa
tccgaagaggacatgatgaaggtccgcaacctgggccgcaaatcgctcgaggaagtgcaa
gagaaactcgaagaactgggcctcggccttcggacggaagagtaa
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