Paenibacillus protaetiae: ET464_17560
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Entry
ET464_17560 CDS
T06829
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pprt
Paenibacillus protaetiae
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ET464_17560
Enzymes [BR:
pprt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ET464_17560
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Beta-prop_CGLA
Motif
Other DBs
NCBI-ProteinID:
QAY68589
UniProt:
A0A4P6F349
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Position
3784640..3786388
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AA seq
582 aa
AA seq
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MEKLDRGLVAVKVSGGVFVSWRLLGTEPSGISFNLYRNGTKVNASPITSSTNYLDPSGTI
SSSYTVKAVLNGTEQAASAAVTPWGQNYLTVPIQKPAGGTTPDGVAYTYSANDASVGDLD
GDGKYEIVLKWDPSNSKDNSQDGYTGNVYIDAYKLDGTRLWRIDMGKNIRAGAHYTQMMV
YDLDGDGKAEIALKTADGTKDGTGQVIGSSTADYRNSAGRILTGPEYLTIFAGATGKILT
TVNYDPPRGNVNDWGDNYGNRVDRFLATIAYLDGERPSLVMARGYYTRTVLVAYNWRGGS
LTKLWTFDTNSSGNSAYAGQGNHNLTAADVDGDGKDEIVYGAMTVNDNGQSLYNTGLGHG
DALHVGDLDPSKAGLEVFKVMENTGATYGAAVWKASNGAIQWGVHTGSDTGRGMAADIDP
RYPGEEVWASSGVGLYQINGTKITSTVPSINFGIWWDGDLSRELLDDNHIDKWNYTNSTT
TNLLTASGTASNNGTKANPALQADLLGDWREEAVWRTTDSTALRIYTTTDVTSTRLYTLM
HDPLYRLDIAWQNVAYNQPPHTSFYLGTGMSTPAAPNIYVTP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactggaccgcggcctcgtggcggtaaaagtaagcggcggcgtatttgtcagc
tggaggctgctgggcacggagccttccggcatctcgtttaacctttaccgcaacggaacg
aaggtgaatgcatcgccgattaccagcagcaccaactatttggacccgtccgggacaatc
agttccagctatactgtcaaagcagtgctgaacggtacggagcaagcagcttctgcagcg
gttacgccctggggacaaaactatttgacggtaccgatccagaagcctgcgggaggcact
acaccggacggagtcgcttacacgtattccgctaatgacgccagtgtcggcgatttggac
ggggacggcaaatatgaaatcgtactgaagtgggacccttccaactccaaagataattca
caggacggttataccggcaatgtgtacattgatgcttacaagctcgacggcacccgcttg
tggcggattgatatgggcaaaaatatacgggccggcgctcattatacgcagatgatggtg
tatgatctggacggtgacggcaaagcggaaatcgctttgaaaacggcggacggcaccaag
gacggcaccggacaggtgattggcagctccacggccgactaccgcaattctgccggacgg
atattaaccggtccggaatatttaacgattttcgccggggcaaccggaaaaatattaacc
accgttaattacgatccgccgcgcggcaacgtcaacgactggggcgataattacggcaac
cgggtcgaccgcttcctggcgacaattgcttacctggacggcgaacggccaagccttgtg
atggcccgcggctattatacccgtaccgtgcttgtcgcgtacaactggcgcggcggctcg
ctgacgaagctgtggacatttgacacgaacagctcgggcaattcggcttatgccggacaa
ggaaaccacaacttgaccgctgccgatgtggatggcgacggcaaggatgaaattgtatac
ggcgcaatgacggtgaatgacaacggacaaagcttgtataatacaggccttgggcacggc
gatgctttgcatgtaggcgaccttgatccgagcaaggcagggctggaagtgtttaaggta
atggaaaatacgggagcaacctatggcgcggctgtgtggaaagcttccaacggggcaatc
cagtggggcgtgcataccggctccgataccggcagagggatggctgcggatatcgacccg
cgttatccgggcgaagaagtatgggcttcctccggtgtaggcttgtaccaaattaacggt
accaaaattacgagcacggttccgtccattaactttggcatttggtgggacggcgatttg
tcgcgcgagctgcttgatgataaccatatcgacaaatggaattataccaacagcacaaca
acgaatctgctgaccgccagcggaacggcttccaacaacggcaccaaagcaaatccggcg
ctccaggccgatctgctgggcgactggcgcgaagaagcggtatggcgcacaacggacagc
acggcattgcggatttataccacgaccgatgtaacgagcacaaggctgtatacgctcatg
catgacccgttataccggctggatattgcttggcagaacgtggcttacaaccagccgccg
catacgagcttttatctcggcaccggcatgtcgacgccagcagctcccaacatttatgtg
acgccttaa
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