Parelusimicrobium proximum: Dip518_000486
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Entry
Dip518_000486 CDS
T11048
Name
(GenBank) exodeoxyribonuclease-3
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pprx Parelusimicrobium proximum
Pathway
pprx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dip518_000486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprx03400
]
Dip518_000486
Enzymes [BR:
pprx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Dip518_000486
DNA repair and recombination proteins [BR:
pprx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dip518_000486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XTP68514
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All DBs
Position
complement(580345..581109)
Genome browser
AA seq
254 aa
AA seq
DB search
MKTMISWNVNGLRAVEKKGFAGWFKQVSPDILALQETKADPSQLSAALRAPEGYHAYFST
AERKGYSGVAVYSKEEPLSVSESIGNASLDGEGRTLILEFDKFYFINIYYPNGGQGEHRI
EYKLRFYDAFLKLAKKLMKKKTVIVCGDVNTAHEEIDLARPKENENNTGFLKRERVWLDK
FFSSGLTDTFRMFNKDGGHYTWWDYKTKARERNVGWRIDYFMIDTASKDKVKKSQMLSDV
TGSDHCPIAVEVDI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgatatcatggaacgtaaacgggctgagagccgtggagaaaaaaggcttt
gccggctggtttaagcaagtctctcctgatattctagctctgcaggaaactaaggcagac
ccgtcgcagctgtctgccgcgctgcgcgctccagaaggctaccacgcttatttcagcact
gcagagcgcaaaggctacagcggggttgccgtctattcaaaagaagagcctttatctgtc
tctgaatctataggaaacgcatcgttagacggagaagggcgcactcttatacttgagttt
gataaattttactttattaacatttactatcccaacggcggccaaggcgagcacaggata
gagtataagctcaggttctacgacgcttttttaaagcttgctaaaaagctgatgaagaaa
aaaaccgtcatagtctgcggggacgttaatacagctcacgaagagattgacctcgcaaga
ccaaaagagaatgagaataacacagggtttttaaagagagaaagagtgtggcttgataag
tttttctcaagcggcttgactgacactttccgcatgtttaataaagacggcgggcactac
acgtggtgggattataaaacaaaagccagagagcgaaacgtaggctggaggatagactat
tttatgatagacacagcctctaaagataaagtaaaaaagtcacaaatgctgagcgacgtc
acaggctccgaccactgcccgatagccgtggaagttgatatataa
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