Parelusimicrobium proximum: Dip518_000569
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Entry
Dip518_000569 CDS
T11048
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pprx Parelusimicrobium proximum
Pathway
pprx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dip518_000569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprx03019
]
Dip518_000569
03400 DNA repair and recombination proteins [BR:
pprx03400
]
Dip518_000569
Enzymes [BR:
pprx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dip518_000569
Messenger RNA biogenesis [BR:
pprx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dip518_000569
DNA repair and recombination proteins [BR:
pprx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dip518_000569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XTP68597
LinkDB
All DBs
Position
684720..686522
Genome browser
AA seq
600 aa
AA seq
DB search
MTPQEALNQIYGYRNFIGLQENIINALMQGKSALALMPTGGGKSLCYQIPALCKDGTALV
VSPLISLMQDQVSSLRQLGIKACALNSMMSSAEARAALSQFLNKELDLLYVSPEKACGED
FLQLLKRVEISLFAIDEAHCISEWGHDFRPEYMQLAVLRQRFPRVPVLALTATADALTRK
DIINNLNISDAEIFIASFDRPNITYGAELKNKEKQQLLNFIESKHADDSGIVYCLSRKRT
EMFAGFLCANGFNAYAYHAGLDNSTRRANQEIFTKREGVIMCATNAFGMGIHKPDVRFVV
HMDLPKSVEAYYQETGRAGRDGIASDAMLFYGMKDIVQLRSFIEESGAGEAQKTVERQKL
NMLIAYAQSASCRRQILLNYFAEEAASSCRACDNCLNPPETYNATVNMQKFLSCVFRAGG
EGYAFGAQHIIDILLGKDNEKITRFRHNTLSTYAIGADTPEDEWKHLSRQAIVMGLVKMD
AQHSSLTLARTAWPVLKGEEDVHLRKAVKPAGKKEKKKLSAKYSLPPHDNELFERLKKLR
RALAEDENVPPYVIFSDKTLLEMAAVKPSTPGMFAEINGVGQFKLQKYAETFLEEINAIV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacacctcaagaagctttaaatcaaatctacggttaccgcaattttataggactacaa
gagaatattataaacgcacttatgcagggtaaaagcgcgcttgctcttatgcctacaggc
ggcggcaaatcactctgttaccagatccccgcgctgtgtaaagacggaacggcgctggta
gtatctcctcttatctctcttatgcaggaccaggtttcctctttaaggcagctgggtatc
aaggcatgcgctcttaactctatgatgagctcggccgaagcgagagccgcattgtcccag
tttttaaacaaagagctggatctcttgtatgtctctcccgaaaaagcatgcggagaggat
tttttacagctgcttaagcgggttgaaatatcactttttgccattgatgaggcgcactgc
atttcagagtgggggcatgatttccgcccggaatatatgcagcttgccgtgctgagacag
cgcttcccccgcgtgcccgttctcgctcttacagccaccgccgacgcgcttaccagaaag
gatattattaacaatcttaatatctctgacgcggagatttttatagccagctttgaccgc
cctaatataacatacggcgccgagcttaaaaataaagaaaaacagcagcttcttaatttt
atagaaagcaaacatgccgatgacagcggcatcgtgtattgcctgagcagaaaacgtact
gaaatgtttgccgggtttttatgcgcgaacgggtttaacgcatatgcctaccatgccggg
ctggataactccacccgccgcgctaaccaagaaatttttactaaaagagaaggcgttatt
atgtgcgcgacaaacgcgttcggcatggggatacataagcctgacgtaaggtttgtagtg
catatggacctgccgaaaagcgtagaggcatactatcaggaaacaggccgcgcgggacgc
gacgggatagcgtcggacgctatgcttttttacggcatgaaagatattgtgcagcttagg
agttttattgaagagtcaggcgcgggagaggcacaaaaaacagtagagagacaaaagctt
aatatgctcattgcctacgcgcagagcgcgtcgtgcagaaggcaaatattgcttaactat
tttgccgaagaggccgcatcctcatgccgcgcgtgtgacaactgtcttaacccgcccgag
acatataacgccactgttaatatgcagaagtttctctcctgcgttttccgcgcgggagga
gaaggatacgcctttggcgcgcagcatataatagatattttgctcggtaaagataatgaa
aagattacccgttttagacacaacacactttccacctacgcaatcggcgctgatacgcct
gaagacgagtggaagcatctctcccgccaagccattgttatggggcttgttaaaatggac
gcgcagcactcttctctgacgcttgcccgcacggcatggccggtgcttaaaggcgaagaa
gatgtgcaccttagaaaagcggtaaaacccgctggtaaaaaagagaagaaaaagctgtcc
gcaaaatattctctcccgccgcatgacaatgagctattcgaaagattgaagaagctgcgc
agagcgcttgccgaggatgaaaacgtccctccttatgtaatattcagcgacaaaactttg
cttgaaatggctgccgtaaagccgtccactcccgggatgtttgcggagatcaacggcgta
ggacaattcaaactacaaaaatacgccgagacttttctcgaagaaataaacgctattgtt
taa
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