Parelusimicrobium proximum: Dip518_000684
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Entry
Dip518_000684 CDS
T11048
Name
(GenBank) DNA helicase-2 / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pprx Parelusimicrobium proximum
Pathway
pprx03420
Nucleotide excision repair
pprx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dip518_000684
03430 Mismatch repair
Dip518_000684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprx03400
]
Dip518_000684
Enzymes [BR:
pprx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dip518_000684
DNA repair and recombination proteins [BR:
pprx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dip518_000684
MMR (mismatch excision repair)
Other MMR factors
Dip518_000684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Viral_helicase1
ResIII
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
XTP68712
LinkDB
All DBs
Position
complement(811253..813577)
Genome browser
AA seq
774 aa
AA seq
DB search
MLKYIYMSLTDHVNSLNKAQKEAVQYNTGPCLIIAGAGTGKTRTLTTKIAVLIEEGVNPS
RILAVTFTNKAAAEMRHRIESLAPGAGGRVWVNTFHSLGVRLLRQHAPYLKLTKDFVIYD
EDEQKKIISMILAEMGQKDTRKEAGQMVSLISRAKDDMVTPDEFSMRANASGGEFLIRTA
DVYKKYQAKLAAAGALDFGDLLVKTYELLTNFEDVREYYQNFFQYVLVDEYQDTNHTQYL
ITKILSVKHKKLCVVGDPDQSIYSWRGANIRNILEFERDFPDAKVIVLEENYRSTQNILA
CANTLIDKNKKRKKKNLFSCKGVGLPVEVREMVTEGEEARYIASTIAHLVEEGVGLNDIA
VFYRTNAQSRNFEDTFRRYQLPYRLIGAVRFYDRKEIKDILAYGRVLVNPADTVSLLRII
NTPKRNIGDTAQDKIISYASQNGIAIYHALKHQAYIEGLTPTARRSINEFMNLMETLRLE
ITHSMPSLIVEKILNLTGYLKILEDGVEKDPENVSRVANLNELVNAVKEYEERKQREETT
PTLSDFLQEIALITGADESEGAESGAVTLMTVHLAKGLEFPYVFVSGLEEGLFPLSSKDE
DELEEERRLCYVAMTRAKDQLYMTSAATRRIFGKMFTNLPSRFLFESGLVEEQPAPVVQQ
PKYTEYKSKYGMYGQKNKSEYSTSYTKKRYDAHGYEEEDNALAYDDAPSREKTEQHLAAA
STAPKVGRRVKHGVFGEGKIISVSGSGEAMKISVVFANGVKRTFLHKYAPLELI
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatatatttatatgtccttaaccgatcatgtaaactcactcaacaaagcccag
aaagaagctgtgcagtataacacgggcccctgccttataatagcgggcgcgggtacgggc
aaaacgagaactttaaccactaaaatagccgttcttatagaagagggggttaacccttca
cgtatactcgcggtgacgtttacaaacaaagccgccgccgagatgcgccaccgtatagag
tctctcgcgccgggcgcggggggcagagtgtgggtaaacacatttcactcattaggagtc
aggctgctcagacagcacgcgccttaccttaagcttactaaagactttgtcatttacgat
gaagacgagcagaaaaaaattatttctatgatacttgccgagatggggcagaaggacacg
cgcaaagaggcggggcagatggtgtcgctcatatcaagagccaaggacgatatggtcacc
ccggacgagtttagcatgagagctaatgcctcgggcggcgagtttctgatacgtacagct
gacgtgtataaaaaatatcaggccaagcttgccgcggcgggcgcactggacttcggcgat
ttgcttgttaagacatatgagctgcttaccaactttgaagatgtaagagagtactaccaa
aactttttccagtatgtgctggtagatgagtatcaagataccaaccatactcagtatttg
attaccaagatactgtctgtcaaacacaaaaagctgtgcgtagtgggcgaccctgaccag
agtatttattcatggcgcggcgctaatataagaaatatcttagagtttgagcgtgacttc
ccagacgctaaggtaatagtgcttgaggagaactaccgctctacgcaaaatattcttgcc
tgcgcgaatactcttatagacaagaacaaaaaacgcaagaagaaaaatttattttcctgc
aaaggcgtcggcctgcccgtagaggtcagagagatggtgaccgagggtgaggaggccaga
tatatagcgtctactatagcgcatctcgtggaagaaggcgtcgggttaaatgacatagcg
gtattttacaggacgaacgcgcagagcagaaactttgaagacactttccgccgttaccag
ctgccttacaggctgatcggcgcggtgcgcttctacgaccgtaaagagattaaagatatt
ttagcctacggcagagtgctggtaaaccctgcagacacagtcagtctgctgcgcattatt
aatacgcctaagagaaatataggagataccgcgcaggataaaattatctcatacgcctcg
caaaacggtatagctatttaccacgcgcttaagcatcaggcttatatcgaggggcttact
cctaccgcccgccgctctatcaatgagtttatgaatcttatggagacgctcaggcttgag
attactcattctatgccgagcctgatcgtagagaaaatacttaacctgacgggatatctc
aaaatcttagaagacggcgtggagaaagaccccgagaacgtctcgagagtggctaactta
aatgagttggtcaacgcggtaaaagagtatgaggagcgcaagcaaagagaggagacgacg
cctactctgtcagacttcctccaagagatagctcttataacaggcgctgacgaaagcgaa
ggcgccgagagcggggctgttactcttatgacagtgcatcttgccaaaggccttgagttt
ccgtatgtgtttgtaagcgggcttgaggaggggctgtttccgttgtccagtaaagacgaa
gacgagcttgaggaagagaggcgcctttgttacgtggctatgacgagggccaaagaccag
ctttatatgaccagcgcggctacgaggaggatattcggtaaaatgtttaccaatctcccg
tccagatttttatttgagagcggccttgtggaggagcagcccgcgcctgtagtgcagcag
cctaagtatacagagtataagtccaagtacggcatgtacgggcagaaaaataaaagcgaa
tactccacgtcttatactaaaaagagatatgacgcgcacggctatgaagaggaagacaac
gctcttgcctacgatgatgcgccgagcagagaaaagaccgagcagcaccttgccgccgcg
tcaacagcgcctaaggtgggcagacgcgtaaagcacggcgtgttcggcgagggtaaaatt
atcagtgtatcggggtcgggagaggcgatgaagatcagcgtagtatttgccaacggcgta
aagcgcaccttcctgcacaaatacgcgcctttagagcttatttga
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