Parelusimicrobium proximum: Dip518_000976
Help
Entry
Dip518_000976 CDS
T11048
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pprx Parelusimicrobium proximum
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprx03032
]
Dip518_000976
03400 DNA repair and recombination proteins [BR:
pprx03400
]
Dip518_000976
Enzymes [BR:
pprx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dip518_000976
DNA replication proteins [BR:
pprx03032
]
Prokaryotic type
DNA Topoisomerases
Dip518_000976
DNA repair and recombination proteins [BR:
pprx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dip518_000976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Chlorophyllase
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
XTP69004
LinkDB
All DBs
Position
1115684..1118161
Genome browser
AA seq
825 aa
AA seq
DB search
MTNEEIKKNYDSSKIQVLEGLEAVRKRPAMYIGSTGLPGLHHLVYEVVDNSVDEILAGGA
TKITVTIKDDMVCSIEDDGRGIPVGPMTNAKDPKLKNKSALEVVLTVLHAGGKFDSGAYK
VSGGLHGVGVSCVNALSEELIAEVKREGYLHKQTFKRGIPQGKVEKIEETKEHGTKITFQ
ADPEIFGALAFSYDTIANRLRELAFLNAGVKIILIDEREENKNHTFLYEGGISQFVQYIN
VNKTVLQPEPIFLTKEENNNYISFAIQYNDSYSENLYSFVNNINTIEGGTHLSGFRSALT
RVINEYIKENGLMKNKDVNLSGDDMREGLTAVLSVKIPHPQFEGQTKTKLGNSEVEGIVR
SIVGEALKTFFEENPKAAKSICEKCISAAVAREAARKARDLTRRKGALEGGGLPGKLADC
QEKNPEKCELFIVEGNSAGGSAKQGRDRVFQAILPLRGKVLNVEKAQLVKILSNEEIRTL
ISAIGTGVGDGEGGFDISKLRYHKIVLMADADVDGQHITTLLLTFFYRQLKPLIEHGFVY
IAQPPLYKVKKGKNEQYLQTEEQLAAWLSKEGLNSIEINAVNGEEKTKLAGAKLEALMKV
LKDVDEMIKKIEFKNITLEEFLSFVKAGQIPVYRTPLQSGGFKYYYSEQEYNDYQEQYIA
EKKEELAAEGADVALIADETLAPEHQSLFEFGKLLSLNNKLKDAGYSLDVYPEIADEKLR
VKPLFSVTDGKGNIKLAYSLEELFKLIKEAGSTGAAIQRYKGLGEMNPEQLWETTMDPAK
RTMLKVAIEDAADTENIFTTLMGDKVEPRRAFIESHALEVKNLDI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaagaaataaagaaaaattatgattcttccaagattcaggttttagagggt
ctggaagcggtaaggaagagaccggctatgtatatcggctcaacgggtcttcccggcctt
catcacttagtgtatgaggttgtggataactctgtggacgagattttagccggcggagca
acaaagatcactgtcactattaaagatgacatggtctgctctatcgaagacgacggccgc
ggtattcccgtaggtcctatgacaaatgccaaagacccgaagcttaaaaacaaaagcgct
ctcgaggttgtgcttacggtgctgcatgcgggcggtaagtttgacagcggcgcttataaa
gttagcggcggtcttcacggcgtcggcgtctcgtgcgtaaacgcgctttcggaagagctt
atcgctgaggtaaagagagagggctatctccacaaacagacatttaaaagaggtattccg
cagggtaaggtagaaaaaattgaggagaccaaagagcacggtaccaagattacttttcag
gcggaccccgaaatcttcggcgcgcttgctttctcatacgacacaatcgctaacagatta
agagagctggcgttcttaaacgcgggcgtaaaaattatcttaatagacgagcgtgaggaa
aacaaaaatcatacatttttatacgaaggcggcatttcacagttcgtccagtatattaac
gtaaacaaaaccgtccttcagcccgagcctatttttctgacgaaagaagagaataataat
tatatttcttttgctattcagtataacgacagctactcggaaaacctttattcatttgtc
aacaacattaataccatagagggcggcacgcacttaagcggcttccgctccgcgcttacg
cgtgtaatcaatgagtatattaaagaaaacggactgatgaaaaacaaagacgttaacctc
tcgggcgacgatatgagagagggtttaacggctgtcttatcggtcaaaataccgcacccg
cagtttgagggtcagacgaaaaccaagctcggcaactccgaggtggaaggtattgtccgc
tcaatcgtgggcgaagctttaaaaacattttttgaagagaatcctaaagccgcaaaatca
atctgcgaaaaatgtatcagcgccgctgtcgccagagaggcggcccgcaaggcgcgcgac
cttacgagaagaaaaggcgctttagaaggcggcggtctgcccggtaagcttgccgactgt
caggagaagaaccctgaaaagtgcgagctgtttattgtagagggtaactcagccggcggc
tctgccaagcagggcagagacagagtgtttcaggctattttaccgctcagaggtaaagtg
cttaacgtagaaaaagcgcagcttgtaaaaattttatctaacgaagaaatccgcacgctg
atatccgctatcggcacgggagtaggagacggtgaaggcggctttgacataagcaagctc
cgctaccacaaaatagtgctcatggctgacgccgacgttgacggacagcatatcacgacc
ttgctgcttactttcttctaccgccagcttaagccgctcatcgagcacggctttgtctat
atcgcacagcctcctttatataaagtaaagaaaggcaaaaacgagcaatatttgcagaca
gaagagcagcttgccgcgtggctttctaaagagggcttaaactctattgagattaacgcc
gtaaacggcgaagagaaaaccaagctcgcaggcgcgaaactcgaggcccttatgaaagtc
ttaaaagacgtagatgagatgatcaaaaaaatcgagtttaaaaatatcactcttgaggag
ttcctctcttttgttaaagcggggcagatccccgtgtacagaacaccgcttcagagcggc
gggtttaagtactactactccgagcaggaatataacgattaccaggagcagtatatagct
gagaaaaaagaagagctcgccgccgagggcgccgatgtcgcgctgatagcggacgagact
ttagcccccgagcaccagtctttatttgagtttggcaagcttctttctttaaacaataag
cttaaagacgcgggatattctttagacgtttatcctgagatagccgatgaaaagctcagg
gttaagcctctcttctccgtaactgacggcaaaggtaatattaagcttgcttacagtctt
gaggagttatttaaacttatcaaagaagccggctcaacaggcgcggcaatacagagatac
aaaggtctcggtgaaatgaaccccgagcagctctgggagaccaccatggatcccgccaag
agaaccatgcttaaggtcgccattgaagacgcggctgacacggagaatatctttacgacg
cttatgggcgataaagtagaacccagaagagcgtttatagaatctcacgcgttagaagtt
aagaacttagatatttaa
DBGET
integrated database retrieval system
