KEGG   Parelusimicrobium proximum: Dip518_001025
Entry
Dip518_001025     CDS       T11048                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pprx  Parelusimicrobium proximum
Pathway
pprx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pprx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dip518_001025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprx03400]
    Dip518_001025
DNA repair and recombination proteins [BR:pprx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Dip518_001025
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Dip518_001025
SSDB
Motif
Pfam: UvrB_3rd UvrB_inter Helicase_C UvrB ResIII UVR DEAD BNI5_helical AAA BrxC_ab
Other DBs
NCBI-ProteinID: XTP69053
LinkDB
Position
1167227..1169254
AA seq 675 aa
MEHNKFKLISGFKPSGDQPGAIEALTKGIKEGKERQTLLGVTGSGKTYTIANVIANMNMP
ALIMSPNKVLAAQLYAEFKSFFPENAVEYFISYYDYYQPEAYVPSTDTYIEKDADINEHI
EKLRLKATSSLLMRNDTIIVASVSSIYNIGSPDNYAELCLYLKKGSKISRSTITGHLIKI
QYEKNELELTAGKFRTRGGFIDILPPYNNAAIRVELAGAEVKAIYEMHPLTGDIIRELAD
TWIYPAKHFVAKDEEILRAIHDIEAELEERIKILEAEGKLLEAQRLKQRTKYDIEMLSQT
GTCAGIENYSRHISGRPEGSMPESLFGYFKKHKDFLVFVDESHVTVPQVRGMYNGDQSRK
STLVTHGFRLPSALDNRPLRFDEFESLLPSTVFVSATPGPYELSVSGNNIAEQVIRPTGL
VDPEVTIHPSHGQIEHLFGKIKETNGRGQRTLVLALTKKTAEDLSTFFIEKGIRAKYLHS
DIESLERVEILKDFRLGKFDVLVGINLLREGIDIPQVGLVAILGADNEGFLRNATTLIQI
SGRAARNVDGEVVLYADRETDSIKYALAEMSRRREKQLAYNAEHNITPKTIIKAEVELAE
FERQAKEEGLGVLHTFTERPTVQNIPKILAEVERQMREAADNLNFELAADLRDKMIELKE
MYVKMRPSSKGGKKK
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggaacacaataagtttaaactaatatcaggctttaagccgtcgggcgaccagcccggc
gctatagaagcgcttaccaaaggcattaaagaaggcaaagaaaggcagactcttttgggc
gtaacgggcagcggtaagacatataccatagccaatgttatagctaatatgaatatgccc
gcgctcatcatgtcgcctaataaggtgctcgcggcgcagctgtatgccgagtttaaatct
tttttccctgaaaacgcggtggagtattttatttcttattatgattattaccagccggaa
gcgtatgtgccttctactgatacttatatagaaaaagacgctgatattaatgaacatatt
gaaaaactgaggcttaaagccacgagctctctgcttatgagaaacgacactattatagta
gcttcggtctctagtatttataatatcggctcacccgacaattatgccgagctatgcttg
tatttaaagaaaggaagcaagatttcgcgctctacgataaccgggcatcttattaaaatc
cagtatgagaaaaacgagcttgagcttaccgcgggcaaattccgcaccagaggcgggttt
attgatatactgcctccttacaataacgcagccatacgcgtagagctggcgggagctgag
gtaaaggctatatatgaaatgcaccccctcacgggcgatattataagagagcttgccgat
acatggatctatcccgccaagcatttcgtagctaaagatgaagagattttaagagccata
cacgatatagaagcggagcttgaagagaggataaaaatactggaggcggaggggaaacta
ttggaggcgcagcgtcttaagcagcgcactaaatatgacatagagatgctgagccagaca
ggcacttgcgcgggtattgaaaactactcccgccatatctcgggcaggcctgagggcagt
atgccggagtcactgttcggctattttaagaagcataaagatttccttgtttttgtggat
gagtcacacgtgacggtgccgcaggtgcgcggcatgtataacggcgaccaaagcaggaag
agtactcttgtcacacacggcttccgcctgccgagcgcgctggataacaggccgcttagg
tttgacgagtttgagagcctgcttccgagcactgttttcgtctccgctacgccggggccg
tatgagctgagtgtcagcggtaataatatagctgagcaggtgatcaggcctacaggcctt
gtggaccccgaggtcactattcacccgagccacgggcagatagagcatctgttcggtaag
attaaagagaccaacggcagaggccagcgcacgcttgtgctcgcgcttactaaaaagacc
gcggaggatctgtctacattttttattgaaaaaggtatcagagctaaatatttacactcg
gacattgagtctttagagcgtgtggagatactaaaggatttcaggctgggcaagtttgac
gtgcttgtgggtattaacctgcttagagaaggcatcgacatcccgcaggtaggtctggtg
gctatactcggtgctgataacgaaggtttcctccgtaacgctaccacgcttatacagata
tctggcagagcagcgaggaacgtagacggtgaggtagtgctctacgcagacagagagaca
gactctattaaatacgcgcttgccgagatgagcagaagacgtgagaagcagcttgcctat
aatgccgagcacaacataacacctaagactattattaaggcggaggtagagcttgctgag
tttgagaggcaggctaaggaagaagggctcggcgtgctgcacacatttaccgagcggccc
acagtgcagaatattcccaaaatacttgccgaggtggagagacagatgcgtgaggcggcg
gataaccttaactttgagcttgccgccgacttgagagacaagatgatagagcttaaagag
atgtatgtaaaaatgcgcccgagcagtaaaggcggtaaaaagaagtag

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