Parelusimicrobium proximum: Dip518_001167
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Entry
Dip518_001167 CDS
T11048
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pprx Parelusimicrobium proximum
Pathway
pprx03030
DNA replication
pprx03430
Mismatch repair
pprx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dip518_001167
03430 Mismatch repair
Dip518_001167
03440 Homologous recombination
Dip518_001167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprx03032
]
Dip518_001167
03400 DNA repair and recombination proteins [BR:
pprx03400
]
Dip518_001167
Enzymes [BR:
pprx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dip518_001167
DNA replication proteins [BR:
pprx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dip518_001167
DNA repair and recombination proteins [BR:
pprx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dip518_001167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
XTP69195
LinkDB
All DBs
Position
1321226..1321828
Genome browser
AA seq
200 aa
AA seq
DB search
MDDLFLFSELDNAEFAFLDTETTGLNPAAGAKICEIAIVVSRGREQIDSFSTLINPGTAI
PYDASSIHGITNEMVASAPRFADVAPQIISMLSGKIAVCHNADFDIPFIACEMAACGMRL
PQVTVLDTLKFARKNGSFKRNNLGNIVTELGLDCSGWHRAMADVKMTEKVFYHFLDKFIA
SGVSTISELSEYQVKKLAVK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttgtttttattttcagagctggataacgcggagtttgcctttttagatacc
gagaccacgggcttaaaccccgcagcgggcgctaagatctgcgagatagcgattgtggtg
agcagaggacgggagcagatagattctttctccacgcttattaacccaggcacggcaata
ccttacgacgcgtcttcaatacacggtattaccaatgaaatggtagcgtccgcgccccgc
tttgccgacgtggccccgcaaataataagcatgcttagcggtaaaattgcggtttgtcat
aacgcggattttgatatcccgtttatcgcgtgcgagatggcggcatgcgggatgaggctg
ccgcaggtaacggtgctggacactcttaaattcgccagaaaaaacggcagctttaagaga
aataatctcggcaatatagtcaccgagctcgggcttgactgctcaggctggcacagagcc
atggcggatgtaaaaatgacggagaaagtgttctaccactttttagataagttcatagcc
tccggcgtaagcacaatatctgaattgtcggaataccaagttaaaaaactcgcggtaaaa
taa
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