Parelusimicrobium proximum: Dip518_001223
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Entry
Dip518_001223 CDS
T11048
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pprx Parelusimicrobium proximum
Pathway
pprx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dip518_001223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprx03019
]
Dip518_001223
03016 Transfer RNA biogenesis [BR:
pprx03016
]
Dip518_001223
Enzymes [BR:
pprx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Dip518_001223
Messenger RNA biogenesis [BR:
pprx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dip518_001223
Transfer RNA biogenesis [BR:
pprx03016
]
Prokaryotic type
tRNA degradation factors
Dip518_001223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
PNPase
KH_NusA_1st
S1_RRP5
KH_PNO1_2nd
NTPase_I-T
KH_2
PCB_OB
KH_NusA_2nd
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
XTP69251
LinkDB
All DBs
Position
1379701..1381797
Genome browser
AA seq
698 aa
AA seq
DB search
MTNSNIKTLSVQVGEKTITLETGLMAKQAHGSVTARCGDTIVLATAVSTLQQKPGIADFV
PLTVNYKERTYAAGKIPGGFFKREARPSKKETLASRIIDRTLRPLFPAGYACETGVMAMV
LSADNVEDAEMLAVIASSAALIISPIPFPTPAASVRVGRIDGQFIINPDLDKSDACDIEL
VIAGTKDGILMVEGGANEVDEETVIKALEIAKPEIDKQCDIQLELQKIAGAPKAELNYET
LPQEVVELGNAKYREQVKSILAAFSDKQTRDVRTAELKAALAEELAEKYPDNKDVYANIE
MENLFYEESRNLVLDKGVRADGRKTDEIRPLSSIVGILPRAHGSALFTRGQTQALAACTL
GTSDDSQMIEGLGETEYERFMLHYNFPGFSTGEVKPDRSPGRREIGHGELARRALLPLLP
SEEVFPHTIRIVSDIMESNGSSSMASVCGGSLCLFDAGVPMKAACSGIAMGLIKEGDKYA
VLSDIMGLEDHLGDMDFKLTGSKKGITAFQMDVKLAGGISIDILKQAIAQATKGRMHIME
HMESVIAEPRKDISQYAPQIYQMKIPQDKIGALIGPGGKNIKKIVEETGAKIDVNDEGIV
QIASANAEKLEAAKKAVESFTKDVEVNQIYEGKVVSIQPFGAFVELLPGKDGLLHISEIE
KHRINKVEDVLKLGDVVKVKVLEIDNNGKVRLSRKALL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattctaatattaaaaccctttccgtgcaggtaggggaaaagaccattaccctc
gaaacagggcttatggcaaagcaggctcacggcagcgtcaccgccagatgcggagacact
atcgtgctcgccaccgctgtttccaccctgcagcagaagcccggtatagccgacttcgtg
cctttaacggtaaactataaagaaagaacatatgccgcgggcaagatccccggcggtttt
ttcaaacgcgaagcaagacccagcaaaaaagagaccttagcctcacgcattatcgacaga
acattaaggccgctgttccccgcgggctacgcttgcgaaacaggcgtaatggccatggtg
ctttcggcagataacgtagaagacgccgagatgcttgccgtaatcgcatccagcgccgcg
cttattatctcacccatcccgttccccactcccgcagcgtctgtaagagtaggcagaatc
gacggacagtttattataaatcccgatcttgataagtctgacgcttgcgacattgagctc
gttatcgccggtaccaaagacggtatcttaatggtagaaggcggagctaatgaagtagac
gaagagaccgttatcaaagctcttgagatcgctaagcccgagattgacaagcagtgcgac
atacagctcgagctgcagaaaatcgccggcgcgcccaaagccgagcttaactacgaaacg
cttccccaagaagtcgtagagctcggtaacgccaaatacagagagcaggtaaaatctatt
ttagccgcgttttcagacaagcagaccagagatgtaagaacggctgagctgaaagcggcg
ctagccgaagagttagctgaaaaatatcctgataataaagacgtatacgccaacatcgag
atggagaacctcttttatgaagagagcagaaaccttgtgctggacaaaggcgtcagagcc
gacggtagaaagactgatgaaatcagacctttaagctctattgtaggtattcttcccaga
gcgcacggctctgctctgtttaccagaggccagactcaggctttagccgcctgtacactg
ggcacatcagatgactcgcagatgatagaaggactcggcgagactgagtatgagagattt
atgcttcactataacttccccggtttttccacaggcgaagtaaagcccgacagatcaccc
ggcagaagagagataggacacggcgagctcgccagaagagcgctgcttcctttgcttcct
tctgaggaagtgttcccccacactatcagaatagtatctgatattatggagtctaacggc
tcgtcctcaatggcttcagtctgcggcggatcattatgcttattcgacgcgggtgtgcct
atgaaggcggcctgctcgggtatcgctatgggtcttattaaagaaggcgacaaatacgcc
gtactctccgacattatgggtcttgaggaccacttgggagacatggactttaagcttacc
ggctctaagaaaggtatcacagccttccagatggacgttaagcttgcgggcggtatatct
attgatatacttaagcaggctatcgctcaggctactaagggcagaatgcacattatggag
cacatggaaagcgtaatcgctgagcccagaaaagatatttcgcagtacgctccgcagatt
taccagatgaaaataccgcaggataagatcggcgctttaatcggccccggcggcaaaaac
atcaagaaaatcgtggaagagacaggcgctaagatcgacgttaacgacgaaggtattgta
caaatcgcctccgccaacgccgagaagctggaagctgctaaaaaagcggtagagtctttt
actaaagatgttgaagttaaccagatctatgaaggtaaagtagtatccatacagcccttt
ggcgcttttgtggagttactgcccggcaaagacggacttctgcatatatccgagatcgag
aaacatagaatcaacaaagttgaggatgttttgaagcttggtgacgtagtaaaagtaaaa
gtacttgaaattgataacaacggaaaagtacgactgtccagaaaagctcttctctaa
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