Pan paniscus (bonobo): 100968021
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Entry
100968021 CDS
T02283
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100968021 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100968021 (POLR1B)
Enzymes [BR:
pps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100968021 (POLR1B)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100968021 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
100968021
NCBI-ProteinID:
XP_054963381
Ensembl:
ENSPPAG00000002774
LinkDB
All DBs
Position
12:complement(15545294..15588412)
Genome browser
AA seq
1164 aa
AA seq
DB search
MRGAGCGNGTPATTSGVYRETGVRCAGGHMDPGSRWRNLPSGPSLKHLTDPSYGIPREQQ
KAALQELTRAHVESFNYAVHEGLGLAVQAIPPFEFAFKDERISFTILDAVISPPTVPKGT
ICKEANVYPAECRGRRSTYRGKLTADINWAVNGISKGIIKQFLGYVPIMVKSKLCNLRNL
PPQALIEHHEEAEEMGGYFIINGIEKVIRMLIMPRRNFPIAMIRPKWKTRGPGYTQYGVS
MHCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELIKG
KEDDSFLRNSVSQMLRIVMEEGCLTQKQVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQC
ICIHLKSNTEKFYMLCLMTRKLFALAKGECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEG
WLVSIKIAFDKKAQKTSVSMNTDNLMKIFTMGIDLTKPFEYLFATGNLRSKTGLGLLQDS
GLCVVADKLNFIRYLSHFRCVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLM
NHLTAVCEVVTQFVYTASIPALLCNLGVTPIDGAPHRSYSECYPVLLDGVMVGWVDKDLA
PGIADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKE
ELIGTMEQIFMNVAIFEDEVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQM
GKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGY
DMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDG
LPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGKFKCVCITM
RVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIE
SMAGKSAALHGLCHDATPFIFSEENSALEYFGEMLKAAGYNFYGTERLYSGISGLELEAD
IFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTS
FLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSAMRNRKYNCTLCNRSDTIDTVS
VPYVFRYFVAELAAMNIKVKLDVV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggagcaggctgcggaaacgggactccggccactacttccggcgtgtaccgagag
actggcgtccggtgtgcaggtggccacatggatcctggcagccggtggcggaacctgccc
agcgggcctagcctaaagcacttgactgacccctcttatggaatcccgcgggaacagcaa
aaggcagcgttgcaggagctgacgcgggcgcatgtggagtccttcaactacgctgtgcac
gagggcctcggcctcgcggtgcaggctatacctccctttgaatttgctttcaaagatgag
cgtatctcttttactattctggatgctgttatcagtccacctacagttccaaaagggacc
atctgcaaagaggccaatgtttatccagcagaatgccggggccgaaggagtacctaccgt
gggaagttgacagctgatatcaactgggcagtgaatggaatctcaaaaggaatcattaag
cagtttcttggctatgttcccatcatggtgaaatccaagctttgcaacttacgtaacctt
cccccacaagccctcattgagcaccatgaggaggcggaggaaatggggggctattttata
atcaatggcattgaaaaagtcatccgaatgttgattatgcctcggagaaattttcccatt
gcaatgataagaccaaaatggaaaaccagagggcctggttatactcagtatggagtttca
atgcactgtgtgagggaagaacattccgctgtcaatatgaacctccactacttggaaaat
ggcactgttatgttgaactttatttaccggaaggaactgttctttcttcctttgggattt
gcacttaaggcacttgtcagcttttctgattatcagatctttcaggagctcatcaaagga
aaagaggatgattctttccttaggaactctgtttctcagatgttaaggattgtaatggaa
gagggttgtttgacacaaaaacaggtccttaactacctaggtgaatgcttcagagtaaaa
ctcaatgttcctgactggtacccaaatgagcaagctgcggagttcctgtttaaccagtgc
atctgtatccacttgaaatccaatactgaaaagttttatatgctttgtctcatgacgcga
aagctctttgctttagccaaaggagagtgcatggaggacaatcctgatagtttggtgaac
caggaagtcctcacaccgggtcagctcttccttatgttcctgaaggaaaaactggaaggt
tggttagtgtctattaaaatagcttttgataagaaggctcagaagaccagtgtttccatg
aacactgacaatttgatgaagatttttacaatgggcatagaccttaccaaaccatttgaa
tacctttttgctacggggaatctgcgttctaaaacaggtcttggcctcctacaagattct
ggactttgtgttgtggctgacaagctgaacttcatacgctacctctcccatttccgctgc
gtgcacagaggggctgattttgccaagatgaggaccaccacagtacgcaggctgctgcca
gagtcctggggcttcctttgtcccgtgcatactccagacggggagccctgtggcctgatg
aaccacctaactgccgtatgtgaggttgtcacacagtttgtgtatacggcatctattcca
gctttactatgcaacttgggggtcactcccattgatggagctccccaccgatcatacagt
gagtgctaccctgtcctgctggacggtgtcatggttggctgggtggataaggatcttgct
ccaggcatcgcagattctcttcgtcattttaaggtgttgagagagaaaagaattcctccc
tggatggaagtggtccttatacccatgacaggaaaaccaagtctgtacccaggattgttc
ctttttaccactccttgtagactggtacggcctgtgcagaacttagaattgggcaaagaa
gagctaattggaactatggaacagatcttcatgaatgtcgctatctttgaggatgaggtt
tttgctggagttaccacacaccaggaactctttccacacagcctgctgagtgtgattgcc
aacttcatccctttctctgatcacaaccagagtccacggaacatgtaccaatgccagatg
ggtaagcaaactatgggctttccacttctcacttatcaagaccgatcggataacaaactg
tatcgtcttcagactcctcagagtcccttggtgagaccctccatgtatgattattatgac
atggataactatccaattgggaccaatgccatcgttgctgtgatttcttacactggctat
gatatggaagatgccatgattgtgaataaggcctcttgggaacgaggctttgcccatgga
agtgtctacaagtctgagttcatagacctctctgaaaaaattaaacaaggagatagtagc
ctggtgtttggaatcaaacctggtgacccacgcgttttgcagaagttagatgacgatgga
ttgccgtttataggagcaaaactgcagtacggagatccgtattacagctacctaaacctc
aacaccggggaaagttttgtgatgtactataagagtaaagaaaattgtgttgtggataac
atcaaagtgtgcagtaatgacactgggagtggaaaattcaagtgtgtttgcatcactatg
agagtgcctcggaacccaactatcggagataaatttgccagtcgccatgggcagaagggc
attttaagcagattgtggccggctgaggacatgccttttactgagagtgggatggtccca
gacattctgttcaatccccatggttttccatcccgcatgaccattgggatgttaattgag
agtatggccgggaagtctgcagctttgcatggtctctgccatgatgctacacccttcatc
ttctcagaggagaactcggccttagaatactttggtgagatgttaaaggctgctggctac
aatttctatggcaccgagaggttatatagtggcatcagtgggctagaactggaagcagac
atcttcataggagtggtttattatcagcgcttacgccatatggtctcagacaaatttcag
gtaaggacaactggagcccgagacagagtcaccaaccagcctattgggggaagaaatgtc
cagggtggaatccgttttggggagatggaacgggatgcgcttttagctcatggtacatct
tttctccttcatgaccgcctcttcaactgctcagatcggtcggtagcccatgtgtgtgtg
aagtgtggcagtttactctctccactgttggagaagccacccccttcttggtctgccatg
cgcaacagaaaatacaactgtactctgtgtaatcgcagtgacactatcgatactgtttct
gtgccttatgtttttcggtattttgtagctgaactggcagctatgaacatcaaagtgaaa
ctggatgttgtttaa
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integrated database retrieval system
