Pan paniscus (bonobo): 100968504
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Entry
100968504 CDS
T02283
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X3
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100968504 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100968504 (PCF11)
03019 Messenger RNA biogenesis [BR:
pps03019
]
100968504 (PCF11)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100968504 (PCF11)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100968504 (PCF11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
100968504
NCBI-ProteinID:
XP_003822040
Ensembl:
ENSPPAG00000009517
LinkDB
All DBs
Position
9:84087368..84116105
Genome browser
AA seq
1555 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED
SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI
DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ
AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH
GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI
EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG
QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG
NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF
GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP
DNHLSQVDVNELFSKLLKTGILKLSQTDSATTQVSEVTAQPPPEEEEDQNEDQDVPDLTN
FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT
HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV
ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE
NPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTENDTVESV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactaggaaaagtttatttaagttacgttct
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacgtctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacacaa
gaacaactaataaggcaacagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacagttggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatccaaattacatgtttcacag
attccccctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaccatccttacaaattcaggatttaaaaggaactaaccgggatcctcgtctgaac
aggataagccaacattctcatggaaaagatcagagtcacaggaaagaatttctaatgaac
acattaaaccagtctgatactaagacaagtaaaactataccctctgaaaaactaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaatta
gattctaaatcgaaatcgaaatcgaaatcaccctcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatcagaaagtatgaggttgtctgatatgaacaagaga
gatccaagattaaaaaaacatcttcaggataagaccgatggcaaagatgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaagtcatccgaacac
agactggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
acagaagagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaacgaaggcaaagaagtatgtctccaacatcgacacctaaagctggaaaa
attcgccaatctggagctaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcgaccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacaacaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcactaaaggaattttatcacctcgagccccaaagcagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtgtgcga
gaagagcagagatctccattcaatgatcgttttccacttaagcgacctcgatatgaagat
tcagataaaccatttgtagatagtccagcatcaagattcgccggcctggatacaaatcag
cgacttacagctttagctgaagacagaccgttatttgatggacctagtaggccatcagta
gcaagagatggcccaacgaagatgatttttgaaggacctaataaattaagccctcgaatt
gatggacctcccacaccagcttctcttcggtttgatgggtcaccaggacaaatgggggga
ggaggccctttgagatttgaggggccacaaggtcagctaggaggtgggtgtcctttgaga
tttgaaggtcctccaggaccagtggggacacctctgcggtttgagggcccaattggtcaa
gcaggaggaggtggttttcggtttgaaggttcccctggtctgaggtttgagggatctcca
ggtggtttgagatttgagggaccaggaggccagcctgtgggtggtctgaggtttgaggga
catcgtggtcaacctgtgggtggtctaaggtttgagggacctcatggtcagcctgtgggt
ggacttagatttgataatccccgaggtcagcctgtaggtggacttagatttgaggggggt
catggtccatcaggggctgcgattaggtttgatggacctcatggtcagccaggaggtgga
atcagatttgagggccctttgctacagcaaggggttggaatgaggtttgagggcccccat
ggtcagtcagtagctggtctgagatttgagggacaacataatcaacttggtgggaacctt
aggtttgagggtccacatggtcaaccaggggttggtatcaggtttgaaggccctttagtc
caacaaggaggtggaatgaggtttgagggtccttctgtaccaggaggtggcctgagaatt
gaagggcctctgggtcaaggtggtccaagatttgaaggttgtcatgctttaaggtttgat
gggcagccaggtcagccgtcactcttgccaagatttgatggattacatggtcagccaggt
cctagatttgaaaggactcctggtcagccaggccctcagaggtttgatggaccacctgga
cagcaggttcaacccagatttgacggtgtacctcaaagatttgatggtccacaacatcag
caagcatcaaggtttgatattcctcttggtcttcaaggcacaagatttgacaatcatcct
tcacaaaggcttgaatcagtatctttcaatcagactggtccatataatgatccacctggc
aatgcttttaatgccccatcccaaggactacagttccaaagacatgaacaaatatttgat
tcacctcaaggaccaaattttaatggaccacatggccctggaaaccagagtttctctaat
ccacttaacagagcttctggacactattttgatgaaaaaaatcttcagagttctcaattt
ggaaactttggcaatatacctgctccaatgacagtaggaaatattcaggcatctcaacag
gttctgagtggtgttgctcagccagtagcttttggtcaaggacaacagtttttaccagtt
catccacaaaatcctggatttgttcagaatccttcaggagccctccctaaggcatatcct
gataatcatctcagtcaggtggatgtaaatgaattgttttcaaaattgctaaaaacagga
attctcaaattgtcccaaactgattcagctacaacacaagtaagtgaagtaactgctcag
cctccccctgaagaggaggaagatcaaaatgaagatcaagatgttccagatcttactaat
tttacagttgaagaattgaaacaacgttatgacagtgttataaatcgactgtacactggt
attcagtgttactcttgtggaatgaggtttacaacatcacagacagatgtttatgcagat
catttggactggcattatcggcaaaatagaactgaaaaggatgttagcagaaaagtcact
catagacgttggtactacagtttaacagactggatagaatttgaggagatagctgatctg
gaagaacgggcaaagagccagttttttgaaaaggtgcatgaagaagttgtgctcaaaact
caagaggctgctaaagaaaaagagttccaaagtgtacctgctggaccagctggagcagtt
gagagttgtgaaatctgtcaagaacaatttgaacaatactgggatgaagaagaggaggaa
tggcatttgaaaaatgctattagagtagatggaaagatttatcatccatcatgttatgaa
gattatcaaaatacatcttcatttgattgtacaccatctcccagcaagacaccagttgaa
aaccccttgaatattatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagt
cccaaagttaaggaagaacgaattgatacaccaccagcttgtacagaggaaagcatagca
acaccctctgaaattaaaacagaaaatgacacagtcgagtcagtttaa
DBGET
integrated database retrieval system
