Pan paniscus (bonobo): 100968931
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Entry
100968931 CDS
T02283
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100968931 (CASC3)
03015 mRNA surveillance pathway
100968931 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100968931 (CASC3)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100968931 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100968931
NCBI-ProteinID:
XP_003831472
Ensembl:
ENSPPAG00000035069
UniProt:
A0A2R9B9B7
LinkDB
All DBs
Position
19:complement(24778328..24815889)
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AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRTGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRRLEQTSVR
DPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEKKSYSRARRTRTKVGDAVKL
AEEVPPPPEGLIPAPPVPETTPTPPTKTGTWEAPVDSSTSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQAGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaagacaccgaggacgaggaatctggtgct
tcgggctccgacagcggcggctccccgttgcggggaggcgggagctgcagcggtagcgcc
ggaggcggcggcagcggttctctgccttcacagcgcggaggccgaaccggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagtgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcggaaggt
gaagaaggtgaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagctaat
gatgctgttaattcttcaacaaaagaagagaagggagaagaaaagcctgacaccaaaagc
actgtgactggagagaggcaaagtggggacggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtcccgacaggagctcatcgctctttat
ggttatgacattcgctcagctcataatcctgatgacatcaaacctcgaagaatccggaaa
ccccgatatgggagtcctccacaaagagatccaaactggaacggtgagcggctaaacaag
tctcatcgccaccagggtcttgggggcaccctaccaccaaggacatttattaacaggaat
gctgcaggtaccggccgtatgtctgcacccaggaattattctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcagcatggtggccggtctggt
gagactgttaagcatgagattagttaccggtcacggcgcctagagcagacttctgtgagg
gatccatctccagaagcagatgctccagtgcttggcagtcctgagaaggaagaggcagcc
tcagagccaccagctgctgctcctgatgctgcaccaccaccccctgataggcccattgag
aagaaatcctattcccgggcaagaagaactcgaaccaaagttggagatgcagtcaagctt
gcagaggaggtgccccctcctcctgaaggactgattccagcacctccagtcccagaaacc
accccaactccacctactaagactgggacctgggaagctccggtggattctagtacaagt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccggggcag
ccttctttcctgcaaccacgggaacttcgaggtatgcccaaccatatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccaggctggtcgagccaaa
cgctattcatcccagcggcaaagacctgtgccagagccccccgcccctccagtgcatatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccgctgcctccacagggcatgcttgtgcagccaggaatgaacctt
ccccacccaggtttacatccccaccagacaccagctcctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcactgcctcccccaccaccgcctcatctgtatcctaatacacaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtacagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcagg
ggttccagttaa
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