Pan paniscus (bonobo): 100969961
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Entry
100969961 CDS
T02283
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100969961 (PTBP1)
03041 Spliceosome [BR:
pps03041
]
100969961 (PTBP1)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100969961 (PTBP1)
Spliceosome [BR:
pps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100969961 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100969961
NCBI-ProteinID:
XP_034802224
LinkDB
All DBs
Position
20:5128176..5143164
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AA seq
557 aa
AA seq
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MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
NGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagatatagccgttggtacaaagcggggatctgacgagcttttc
tctacttgtgtcactaacggaccgtttatcatgagcagcaactcggcttctgcagcaaac
ggaaatgacagcaagaagttcaaaggtgacagccgaagcgcaggcgtcccctctagagtg
atccacatccggaagctccccatcgacgtcacggagggggaagtcatctccctggggctg
ccctttgggaaggtcaccaacctcctgatgctgaaggggaaaaaccaggccttcattgag
atgaacacagaggaggctgccaacaccatggtgaactactacacctcggtgacccctgtg
ctgcgcggccagcccatctacatccagttctccaaccacaaggagctgaagaccgacagc
tctcccaaccaggcgcgggcccaggcggccctgcaggcggtgaactcggtccagtcgggg
aacctggccttggctgcctcggcggcggccgtggacgcagggatggcgatggccggacag
agccccgtgctcaggatcatcgtggagaacctcttctaccctgtgaccctggatgtgctg
caccagattttctccaagttcggcacagtgttgaagatcatcaccttcaccaagaacaac
cagttccaggccctgctgcagtatgcggaccccgtgagcgcccagcacgccaagctgtcg
ctggacgggcagaacatctacaacgcctgctgcacgctgcgcatcgacttttccaagctc
accagcctcaacgtcaagtacaacaatgacaagagccgcgactacacacgcccagacctg
ccttccggggacagccagccctcgctggaccagaccatggccgcggccttcggtgcacct
ggtataatctcagcctctccgtatgcaggagctggtttccctcccacctttgccattcct
caagctgcaggcctttccgttcccaacgtccacggcgccctggcccccctggccatcccc
tcggcggcggcggcagctgcggcggcaggccggatcgccatcccgggcctggcgggggca
ggaaattctgtattgctggtcagcaacctcaacccagagagagtcacaccccaaagcctc
tttattcttttcggcgtctacggtgacgtgcagcgcgtgaagatcctgttcaataagaag
gagaacgccctagtgcagatggcggacggcaaccaggcccagctggccatgagccacctg
aacgggcacaagctgcacgggaagcccatccgcatcacgctctcgaagcaccagaacgtg
cagctgccccgcgagggccaggaggaccagggcctgaccaaggactacggcaactcaccc
ctgcaccgcttcaagaagccgggctccaagaacttccagaacatattcccaccctcggcc
acgctgcacctctccaacatcccgccctcagtctccgaggaggatctcaaggtcctgttt
tccagcaatgggggcgtcgtcaaaggattcaagttcttccagaaggaccgcaagatggcg
ctgatccagatgggctccgtggaggaggcggtccaggccctcattgacctgcacaaccac
gacctcggggagaaccaccacctgcgggtctccttctccaagtccaccatctag
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integrated database retrieval system
