Pan paniscus (bonobo): 100970251
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Entry
100970251 CDS
T02283
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100970251 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pps03041
]
100970251 (DHX16)
Enzymes [BR:
pps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100970251 (DHX16)
Spliceosome [BR:
pps03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100970251 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
100970251 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
SecA_DEAD
nSTAND3
SRP54
Flavi_DEAD
Cas3-like_C_2
GIPC1_GH2
Motif
Other DBs
NCBI-GeneID:
100970251
NCBI-ProteinID:
XP_003807393
Ensembl:
ENSPPAG00000025169
UniProt:
A0A2R8ZUN8
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All DBs
Position
5:complement(45213250..45233242)
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AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGSSLQK
KRKKRKHLRKKREEEEEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHAKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcgggtctggagcgctgggttcaggacgagctgcactcggtgttgggg
ctgagcgagcggcacgtcgcccagtttctgatcggtaccgcacagcgctgcacctcggcc
gaggagttcgtgcagcgcctacgagacactgataccttggatctcagtgggccggcccgg
gacttcgccctgagactctggaacaaggtaccacgaaaggcagtggtagaaaagccagct
cgggcagcagagcgagaggcccgggccctgctggagaagaaccgatcttataggttactg
gaagacagtgaagagagcagtgaggagactgtgagtagggctggaagcagcctccagaag
aaacgtaaaaagcggaaacacctcaggaagaagcgtgaggaagaagaggaagaagaggag
gaagaggcttctgagaaagggaagaagaaaacaggggggagtaaacagcagacagagaag
ccagagtcggaagatgagtgggaacggacagagcgtgaacgccttcaggacctggaggag
cgtgatgcctttgctgagcgggttcgacagcgggacaaggatcggactcgaaatgtcctg
gaacggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggccgaggaa
gaccgaaaggccatggtccctgagctgcggaagaagtctcgccgagagtacctggctaag
cgggagcgagagaagcttgaggacctggaggcggagctggctgatgaggagttccttttt
ggggacgtggagctgagccggcacgagcggcaggagctcaaatataagcggcgagtgcgg
gatctcgcccgggagtaccgggcagctggggagcaggagaagctggaggccaccaatcgc
taccacatgcccaaggaaacccgaggacagccagcccgagctgtggatctagtggaggag
gaatcaggagcccctggggaggagcagcggcgctgggaggaggcgcggcttggggcagcg
tccctgaagtttggggcccgagatgctgcctctcaggagcccaagtatcaactggtgctg
gaggaggaggagaccattgagtttgtccgggccactcagctccagggtgatgaggagccg
tcagctccacccacttcaactcaggcccagcagaaagagtccatccaggccgtccgccgc
agcctcccagtgttcccatttcgagaggagctcctggctgctattgcaaatcaccaagtc
ctcatcattgaaggcgagacaggctcagggaagaccacccagatcccgcagtatctcttt
gaggagggttatacaaacaagggtatgaagattgcctgcacccaaccccggagagtggct
gccatgagtgtggccgcccgagtggcccgggagatgggtgtgaagcttgggaatgaggtt
ggctacagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgaca
gatgggatgcttctccgggagttcctctctgagcctgacctggcgagttacagcgtggtg
atggtggatgaggcacacgaaaggaccctacacacagacattctctttggattgatcaag
gatgttgctcgcttccgacctgagctcaaggtcctggtggcttcagccacaatggacact
gcccgtttttccaccttctttgatgacgcccctgtgtttcgaatccccggacgcaggttt
cctgtggacatcttctacaccaaggctccagaggctgactacttggaagcttgtgtagta
tctgtgttgcagatccatgtgacccagccccctggggatatcctggtgttcctgacagga
caggaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aaaatccgggagctcctggtgctgcccatttatgccaatctgccctctgacatgcaggcc
cgtatcttccagcccacaccacctggggcacgaaaggtggttgtggcaacgaacattgct
gagacatcactcaccattgaaggcatcatttatgtgctggatccagggttctgtaagcag
aagagctacaacccccgcacaggcatggaatcgctcactgtcacaccctgcagcaaggcc
tcagccaatcagcgagctggcagggcaggtcgggtggctgcagggaagtgcttccgcctg
tataccgcctgggcctatcagcacgagcttgaggaaaccacagtgcctgagatccagagg
accagcttgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatgcac
tttgatttcctggaccctccaccatatgagacactgctgctggctttggagcagctgtat
gctctgggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggcagag
ctgccggtggaccccatgctgtccaaaatgatcttagcctctgagaagtacagctgttca
gaggagatcctgacagtggctgccatgctctctgtcaacaactccatcttctaccgacca
aaggacaaggtcgtccatgctgacaatgcccgtgtcaacttctttctccctggcggtgac
cacctggttctgctaaatgtttacacacagtgggctgagagtggttactcttcccagtgg
tgctatgagaactttgtacagttcagatcgatgcgccgagcccgggatgtgcgggaacag
ctggaagggctcttagaacgtgtggaagttggtctcagttcctgccagggggactatatc
cgtgtacgcaaggccatcactgctggttacttttaccacacggcacggttgactcggagt
ggctaccgcacagtgaaacagcagcagacagtcttcattcatcccaactcctccctcttt
gagcaacagccacgctggctgctctaccacgaacttgtcttgaccaccaaagagttcatg
agacaggtactggagattgagagcagttggcttctggaggtggctccccattattataag
gccaaggagctagaagatccccatgctaagaaaatgcccaaaaaaataggcaaaacacga
gaagagctagggtaa
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integrated database retrieval system
