Pan paniscus (bonobo): 100970535
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Entry
100970535 CDS
T02283
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100970535 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pps00536
]
100970535 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pps00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100970535 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100970535
NCBI-ProteinID:
XP_054967674
Ensembl:
ENSPPAG00000027300
LinkDB
All DBs
Position
3:complement(106903996..107403679)
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AA seq
660 aa
AA seq
DB search
MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ
ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGKSLFQLLCVTHGPPGPKGDKGEQGDQGPRGLPGFPTVAALHS
NQILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEEGLMGPLGP
PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGE
KGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTK
GERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDSGAQGPRGPPGQKG
DQGATEIIDYNGNLHEALQGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDTGD
PGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLP
GPKGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLD
GFPGPRGEKGDLGEKGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagaagcacgcagggaaaggagggggccgggagcccagatccgaggacccg
acccctgccgaacagcattgtgcccggaccatgcccccgtgtgccgtcctggcggccctc
ctgtcagtggtggccgtggtgtcttgcctgtacctgggtgtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaaggggccccttccattcatctgctgcctgat
accctggatcacctcaagactatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagaatgtaactgc
ccagcaggccctccagggaaacgaggtaagagaggccgaagaggagaatctggtaagtct
ctctttcagctgctctgtgtcactcatggccctcctggtccaaaaggtgataagggagaa
caaggtgatcagggacctaggggcctgccaggcttccccacagttgctgccctgcacagt
aatcagatcctcaccgtcaagggtgaccaaggacaggcagggcctccaggaccccctggc
cctccaggcccaagagggccacctggggacacagggaaagatggcccccgtggaatgcca
ggagtacccggtgaaccaggaaaaccaggagaagaaggcttgatgggtcctctagggcct
ccgggacaaaagggttctattggagcacctggaattccagggatgaatgggcaaaagggt
gagcccgggttgcctggagcagtaggacagaatggaataccaggacctaagggagaacct
ggagaacaaggtgaaaagggagatgctggagagaatggccccaagggtgacacaggcgaa
aagggtgaccctggatcatctgctgcaggaattaagggagaacctggggaatctggtcgt
ccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaaggga
gaaccaggtttcattggtcctcaaggagaaccaggcttaccgggtttaccaggaacaaaa
ggtgaacggggggaagcagggcctcctggaagaggtgagcgaggggaacctggagccccc
ggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggggat
cgtggagacaaaggggactctggagctcagggaccaaggggtccacctggtcaaaaaggg
gatcaaggagccactgagatcatagactacaacggcaacctccacgaagccttacagggt
ccccctggacctcctggacctcaaggactacaagggccaaagggagagcagggatctcca
ggaatcccaggaatggatggagaacagggactcaaaggctcaaagggagacacgggggac
ccaggtatgacaggtgaaaaaggaggaattggacttcctggattaccgggagccaatgga
atgaaaggagaaaaaggagattctggaatgccgggtccacagggtccttctatcataggc
ccaccaggcccaccaggtccccatggcccacctggccccatgggacctcatggacttcct
ggaccaaagggagcatctggcttagacggaaagccaggatcccggggtacagatggtcct
atgggaccccatggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatggga
gagcctggaccaagagggccctatgggctgcctgggaaagatggagagcctggtcttgat
ggcttccctggtccacggggtgagaagggtgatctaggagaaaagggagaaaagggggaa
aagggaaagaaaggcaaaaaggggcctaaaggggagaaaggagaacagggtgctcctgga
ttagatgcaccctgcccgttggggccagatggcttacccatgcctggctgttggcaaaag
tga
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