Entry |
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Symbol |
ATXN2
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Name |
(RefSeq) ataxin-2 isoform X10
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KO |
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Organism |
pps Pan paniscus (bonobo)
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Pathway |
pps05022 | Pathways of neurodegeneration - multiple diseases |
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Brite |
KEGG Orthology (KO) [BR:pps00001]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100971117 (ATXN2)
05017 Spinocerebellar ataxia
100971117 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
100971117 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pps03019]
100971117 (ATXN2)
Messenger RNA biogenesis [BR:pps03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100971117 (ATXN2)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
10:complement(119518592..119667397)
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AA seq |
1340 aa
MRSAAAAPRSPAVATESRRFAAARWPGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGP
GPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGLGGPPRPFVVLLLPLASPGAPPAA
PTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYGPLTMSLKPQQQQQQQQQQQQQQQ
QQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATAPSSVVAATSGGG
RPGLGRGRNSNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYS
PKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAI
SAKVNGEHKEKDLEPWDAGELTANEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSS
LSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNS
SEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPN
SGSDQRVVNGVFILSFISFVLSGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPS
RPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSG
LEFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPV
LASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTPSSEAKDSRLQDQRQNSPAGNKENI
KPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGE
KSRDLIKDKIEPSAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQ
TSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSP
SMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVKYLE
LELLRYVPNMPQQRQDQHHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQPLVQ
HVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYN
KETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQH
HQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHV
QPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVST
TAHFPYMTHPSVQAHHQQQL |
NT seq |
4023 nt +upstreamnt +downstreamnt
atgcgctcagcggccgcagctcctcggagtcccgcggtggccaccgagtctcgccgcttc
gccgcagccaggtggcccgggtggcgctcgctccagcggccggcgcggcggagcgggcgg
ggcggcggtggcgcggccccgggaccgtatccctccgccgcccctcccccgcccggcccc
ggcccccctccctcccggcagagctcgcctccctccgcctcagactgttttggtagcaac
ggcaacggcggcggcgcgtttcggcccggctcccggcggctccttggtctcggcgggcct
ccccgccccttcgtcgtcctccttctccccctcgccagcccgggcgcccctccggccgcg
ccaacccgcgcctccccgctcggcgcccgcgcgtccccgccgcgttccggcgtctccttg
gcgcgcccggctcccggctgtccccgcccggcgtgcgagccggtgtatgggcccctcacc
atgtcgctgaagccccagcagcagcagcagcagcagcagcagcagcaacaacaacagcag
cagcagcaacagcagcagcagcagcagcagccgccgcccgcggctgccaatgtccgcaag
cccggcggcagcggccttctagcgtcgcccgccgccgcgccttcgccgtcctcgtcctcg
gtctcctcgtcctcggccacggctccctcctcggtggtcgcggcgacctccggcggcggg
aggcccggcctgggcagaggtcgaaacagtaacaaaggactgcctcagtctacgatttct
tttgatggaatctatgcaaatatgaggatggttcatatacttacatcagttgttggctcc
aaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacttacagt
ccgaagtgtgatttggtacttgatgccgcacatgagaaaagtacagaatccagttcgggg
ccgaaacgtgaagaaataatggagagtattttgttcaaatgttcagactttgttgtggta
cagtttaaagatatggactccagttatgcaaaaagagatgcttttactgactctgctatc
agtgctaaagtgaatggcgaacacaaagagaaggacctggagccctgggatgcaggtgaa
ctcacagccaatgaggaacttgaggctttggaaaatgacgtatctaatggatgggatccc
aatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacgtatgatagcagt
ttatcttcgtatacagtgcccttagaaagagataactcagaagaatttttaaaacgggaa
gcaagggcaaaccagttagcagaagaaattgagtcaagtgcccagtacaaagctcgagtg
gccctggaaaatgatgataggagtgaggaagaaaaatacacagcagttcagagaaattcc
agtgaacgtgaggggcacagcataaacactagggaaaataaatatattcctcctggacaa
agaaatagagaagtcatatcctggggaagtgggagacagaattcaccgcgtatgggccag
cctggatcgggctccatgccatcaagatccacttctcacacttcagatttcaacccgaat
tctggttcagaccaaagagtagttaatggagtttttatactttccttcatatcatttgtt
ctgtcaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgc
taccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccctcc
aggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctccagct
cctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaag
gcccagcgacatcctcgaaatcacagagtttctgctgggaggggttccatatccagtggc
ctagaatttgtatcccacaacccacccagtgaagcagctactcctccagtagcaaggacc
agtccctcggggggaacgtggtcatcagtggtcagtggggttccaagattatcccctaaa
actcatagacccaggtctcccagacagaacagtattggaaatacccccagtgggccagtt
cttgcttctccccaagctggtattattccaactgaagctgttgccatgcctattccagct
gcatctcctacgcctgctagtcctgcatcgaacagagctgttaccccttctagtgaggct
aaagattccaggcttcaagatcagaggcagaactctcctgcagggaataaagaaaatatt
aaacccaatgaaacatcacctagcttctcaaaagctgaaaacaaaggtatatcaccagtt
gtttctgaacatagaaaacagattgatgatttaaagaaatttaagaatgattttaggtta
cagccaagttctacttctgaatctatggatcaactactaaacaaaaatagagagggagaa
aaatcaagagatttgatcaaagacaaaattgaaccaagtgctaaggattctttcattgaa
aatagcagcagcaactgtaccagtggcagcagcaagccgaatagccccagcatttcccct
tcaatacttagtaacacggagcacaagaggggacctgaggtcacttcccaaggggttcag
acttccagcccagcatgtaaacaagagaaagatgataaggaagagaagaaagacgcagct
gagcaagttaggaaatcaacattgaatcccaatgcaaaggagttcaacccacgttccttc
tctcagccaaagccttctactaccccaacttcacctcggcctcaagcacaacctagccca
tctatggtgggtcatcaacagccaactccagtttatactcagcctgtttgttttgcacca
aatatgatgtatccagtcccagtgagcccaggcgtgcaacctttatacccaatacctatg
acgcccatgccagtgaatcaagccaagacatatagagcaggtaaagttaaatacctagaa
ttggaattgctgaggtatgtaccaaatatgccccaacagcggcaagaccagcatcatcag
agtgccatgatgcacccagcgtcagcagcgggcccaccgattgcagccaccccaccagct
tactccacgcaatatgttgcctacagtcctcagcagttcccaaatcagccccttgttcag
catgtgccacattatcagtctcagcatcctcatgtctatagtcctgtaatacagggtaat
gctagaatgatggcaccaccaacacacgcccagcctggtttagtatcttcttcagcaact
cagtacggggctcatgagcagacgcatgcgatgtatgcatgtcccaaattaccatacaac
aaggagacaagcccttctttctactttgccatttccacaggctcccttgctcagcagtat
gcgcaccctaacgctaccctgcacccacatactccacaccctcagccttcagctaccccc
actggacagcagcaaagccaacatggtggaagtcatcctgcacccagtcctgttcagcac
catcagcaccaggccgcccaggctctccatctggccagtccacagcagcagtcagccatt
taccacgcggggcttgcgccaactccaccctccatgacacctgcctccaacacgcagtcg
ccacagaatagtttcccagcagcacaacagaccgtctttacgatccatccttctcacgtt
cagccggcgtataccaacccaccccacatggcccacgtacctcaggctcatgtacagtca
ggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagcca
cccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgaca
acagcgcatttcccctatatgacgcacccttcagtacaagcccaccaccaacagcagttg
taa |