Pan paniscus (bonobo): 100971857
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Entry
100971857 CDS
T02283
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pps
Pan paniscus (bonobo)
Pathway
pps05017
Spinocerebellar ataxia
pps05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100971857 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100971857 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100971857 (VLDLR)
Membrane trafficking [BR:
pps04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100971857 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
100971857
NCBI-ProteinID:
XP_003823400
Ensembl:
ENSPPAG00000029389
LinkDB
All DBs
Position
11:complement(121929854..121963106)
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AA seq
1185 aa
AA seq
DB search
MLVAPGNCKYPPGARPVSGEAVATATIVASALTAAAAAACSAGGCREGTVMTVGSAQLLR
RQVPWIRKLGQAPGIGGEGGARANQRPPRAPVSPRRTRGAAGPLEQSGWRRRRPRPRPRP
RSLTRAHTRTLPARAPGCPARVRGAHRGKGGLKPPRARPPAAPPVDHSPSRPLPVPHPAL
QPPPLWVLRYRLLSVLSSLLLSAPHPLSLPSSPLASPPLQRLHYFLPAGSACTAAAARGG
GWVGGWVGGEEIVQVVGEGVPSSSPLPSPPNSFPLLLPLSPPRPHLLPPFGRAGNLLCGA
NGGGGGTIQAGTMGTSALWALWLLLALCWAPRESGATGTGRKAKCEPSQFQCTNGRCITL
LWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQC
HMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCIS
RNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQ
CGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDG
SCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWS
DEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQ
ICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQL
RNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIY
WTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNG
FDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPL
ALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEE
DMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNVEENGRDCQSTATTVTYSETKDTNTTE
ISPTSGLVPGGISVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMK
SMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgcccctggaaactgcaagtaccccccaggtgcacgccccgttagtggggag
gcggtggcaacagcaacgatagttgcatcagcgctaactgctgctgctgctgctgcatgt
tctgctggaggctgccgggagggtacagtaatgactgtagggagcgcacagctgctgcgg
cggcaggttccctggatcaggaaattaggacaggcaccggggattggaggcgagggcggt
gcgcgagccaaccagcggccgccccgggcccccgtgagccccaggcgaacgcgcggagca
gccgggcccctagagcagtccgggtggcggcggcggcggccacgaccacgaccacgacca
cggtcactcacgcgcgctcacactcgcacactccccgcgcgggcacccggctgcccggcg
cgtgtaagaggagcgcatcgagggaaaggagggctgaagccgccgcgcgcccgcccgccc
gccgcgcctcccgttgaccactccccctcccgccccctccccgttcctcaccccgctctc
cagccgccgccgctgtgggtgctccgctaccggctcctctctgttctgtcctctcttctg
ctctcggctccccaccccctctcccttccctcctctccccttgcctcccctcctctgcag
cgcctgcattattttctgcccgcaggctcggcttgcactgctgctgcagcccggggaggt
gggtgggtgggtgggtgggtgggtggggaggagattgtgcaagttgtgggggagggggtg
ccctcttcttccccgctcccttccccccccaactccttccccctccttctccccctttcc
cctccccgcccccaccttcttcctcctttcggaagggctggtaacttgttgtgcggagcg
aacggcggcggcggcggcaccatccaggcgggcaccatgggcacgtccgcgctctgggcg
ctctggctgctgctcgcgctgtgctgggcgccccgggagagcggcgccaccggaaccggg
agaaaagccaaatgtgaaccctcccaattccagtgcacaaatggtcgctgtattacgctg
ttgtggaaatgtgatggggatgaagactgtgttgacggcagtgatgaaaagaactgtgta
aagaagacgtgtgctgaatctgacttcgtgtgcaacaatggccagtgtgttcccagccga
tggaagtgtgatggagatcctgactgtgaagacggttcagatgaaagcccagaacagtgc
catatgagaacatgccgcataaatgaaatcagctgtggcgcccattctactcagtgtatc
ccagtgtcctggagatgtgatggtgaaaatgattgtgacagtggagaagatgaagaaaac
tgtggcaatataacatgtagtcccgacgagttcacctgctccagtggccgctgcatctcc
aggaactttgtatgcaatggccaggatgactgcagcgatggcagtgatgagctggactgt
gccccgccaacctgtggcacccatgagttccagtgcagcacctcctcctgcatccccatc
agctgggtatgcgacgatgatgcagactgctccgaccagtctgatgagtccctggagcag
tgtggccgtcagccagttatacacaccaagtgtccagccagcgaaatccagtgcggctct
ggcgagtgcatccataagaagtggcgatgtgatggggaccctgactgcaaggatggcagt
gatgaggtcaactgtccctctcgaacttgccgacctgaccaatttgaatgtgaggatggc
agctgcatccatggcagcaggcagtgtaatggtatccgagactgtgtcgatggttccgat
gaagtcaactgcaaaaatgtcaatcagtgcttgggccctggaaaattcaagtgcagaagt
ggagaatgcatagatatcagcaaagtatgtaaccaggagcaggactgcagggactggagt
gatgagcccctgaaagagtgtcatataaacgaatgcttggtaaataatggtggatgttct
catatctgcaaagacctagttataggctacgagtgtgactgtgcagctgggtttgaactg
atagataggaaaacctgtggagatattgatgaatgccaaaatccaggaatctgcagtcaa
atttgtatcaacttaaaaggcggttacaagtgtgaatgtagtcgtggctatcaaatggat
cttgctactggcgtgtgcaaggcagtaggcaaagagccaagtctgatcttcactaatcga
agagacatcaggaagattggcttagagaggaaagaatatatccaactagttgaacagcta
agaaacactgtggctctcgatgctgacattgctgctcagaaactattctgggctgatcta
agccaaaaggctatcttcagtgcctcaattgatgacaaggttggtagacatgttaaaatg
atcgacaatgtctataatcctgcagccattgctgttgattgggtgtacaagaccatctac
tggactgatgcggcttctaagactatttcagtagctaccctagatggaaccaagaggaag
ttcctgtttaactctgacttgcgagagcctgcctccatagctgtggacccactgtctggc
tttgtttactggtcagactggggtgaaccagctaaaatagaaaaagcaggaatgaatgga
ttcgatagacgtccactggtgacagcggatatccagtggcctaacggaattacacttgac
cttataaaaagtcgcctctattggcttgattctaagttgcacatgttatccagcgtggac
ttgaatggccaggatcgtaggatagtactaaagtctctggagttcctagctcatcctctt
gcactaacaatatttgaggatcgtgtctactggatagatggggaaaatgaagcagtctat
ggtgccaataaattcactggatcagagctagccactctagtcaacaacctgaatgatgcc
caagacatcattgtctatcatgaacttgtacagccatcaggtaaaaattggtgtgaagaa
gacatggagaatggaggatgtgaatacctatgcctgccagcaccacagattaatgatcac
tctccaaaatatacctgttcctgtcccaatgggtacaatgtagaggaaaatggccgagac
tgtcaaagtactgcaactactgtgacttacagtgagacaaaagatacgaacacaacagaa
atttcaccaactagtggactagttcctggagggatcagtgtgaccacagcagtatcagag
gtcagtgttcccccaaaagggacttctgccgcatgggccattcttcctctcttgctctta
gtgatggcagcagtaggtggctacttgatgtggcggaattggcaacacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaaaaccactgaagaggacctctccatagac
attggtagacacagtgcttctgttggacacacgtacccagcaatatcagttgtaagcaca
gatgatgatctagcttga
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integrated database retrieval system
