Pan paniscus (bonobo): 100971883
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Entry
100971883 CDS
T02283
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100971883 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100971883 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pps03019
]
100971883 (SUPT5H)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100971883 (SUPT5H)
RNA polymerase I system
100971883 (SUPT5H)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100971883 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100971883
NCBI-ProteinID:
XP_008962889
Ensembl:
ENSPPAG00000040180
UniProt:
A0A2R9C9U3
LinkDB
All DBs
Position
20:45739186..45772352
Genome browser
AA seq
1083 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARR
LQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKC
KIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGN
LRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTIS
LKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGN
RYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGD
NVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGR
FEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDP
QTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVID
GPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAP
MSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVV
KDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRT
PMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEP
TPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP
SPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYN
PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVS
ISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKL
LEA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttttccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgcagcgggcagtgagaaagaagaa
gagcctgaggacgaagaggaagaggaagaggaggaggaatacgatgaggaagaggaggaa
gaagatgatgaccgaccccccaagaaaccccgccatggaggcttcattctggacgaggct
gatgttgacgatgagtatgaggacgaggaccagtgggaggatggagcagaggacatccta
gagaaagcctccaatatcgataatgttgtcctggatgaagatcgttctggggctcgccgc
ctgcaaaacctctggagggaccagcgagaagaagaactgggcgagtattacatgaagaaa
tacgccaagtcatctgtgggagagacggtgtatggaggatctgatgagctctcagatgac
atcacccagcagcagctgctcccaggagtcaaggatcccaatctgtggactgtcaaatgt
aagattggggaggaacgggccacggccatttccttgatgcgcaagttcattgcctaccag
ttcacagacacgcccctgcagatcaagtcagtagtggcaccagagcatgtgaagggctac
atctacgtggaggcctacaagcagacccacgtgaagcaggccattgagggggtgggcaac
ctgcggcttggctactggaaccagcagatggtgcccatcaaggagatgacagacgtgctc
aaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgcctcaagcggggc
atctacaaggatgacattgctcaggtggactacgtggagcccagccagaacaccatctcc
ctgaagatgatcccacgcatcgactacgatcgcatcaaggcccgcatgagcttgaaagac
tggtttgccaaaaggaagaagtttaagcggcctccacagaggctgtttgatgctgagaag
atcaggtccctggggggtgatgttgcctctgatggtgacttcctcatctttgaggggaac
cgttacagccggaagggctttctgttcaagagcttcgccatgtctgctgtgatcacggag
ggtgtgaagccaacactctctgagctggaaaagtttgaggaccagccagagggcattgac
ctggaggtggtgactgagagcacagggaaggagcgggagcacaacttccaacctggggac
aacgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatcctcagcgtggat
ggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatgttggagttccca
gcccaggaacttcggaaatacttcaagatgggggaccacgtgaaggtgattgccggccga
ttcgagggcgacacaggcctcattgtgcgggtggaggagaatttcgttatcctgttctct
gacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctctgctcagagaca
gcatcaggtgtggatgttgggggccagcatgaatggggcgagctggtgcagctggatccc
cagactgtgggtgtcatcgtgcgactagaacgggagaccttccaggtgctgaacatgtac
gggaaggtggtgactgtcagacatcaggctgtgacccggaagaaggacaaccgctttgct
gtggccttggactcagagcagaacaatatccatgtgaaagacatcgttaaggtcattgat
ggcccccactcaggccgagaaggggagattcgccatcttttccgaagcttcgccttccta
cattgcaagaaactggtggagaacgggggcatgtttgtctgcaagacccgccacctggtg
ctggctgggggctcaaagccccgtgatgtgaccaacttcaccgtgggtggctttgcgcct
atgagtccccggatcagcagccccatgcaccccagtgctggaggtcagcgtggcggcttt
ggtagcccaggtggcggcagtggtggcatgagcaggggccggggccggagggacaacgaa
ctcatcggccagaccgtgcgcatctcccaggggccctacaaaggctacatcggtgtggtg
aaggatgccacagagtccacggcccgtgtggagctgcactccacctgccagaccatctct
gtggaccgtcagcggctcaccacggtgggctcacggcgcccgggcggcatgacctcgacc
tatgggaggacgcccatgtatggctcccagacgcccatgtatggctctggctcccgaaca
cccatgtacggctcacagacacccctccaggatggtagccgcaccccacactacggctcg
cagacgcccctgcatgatggcagccgcactcctgcccagagtggggcctgggaccccaac
aaccccaacacgccatcacgggctgaggaagaatatgagtatgctttcgatgatgagccc
accccgtccccgcaggcctatgggggaacccccaatccccaaacacctggctacccagac
ccctcatccccacaggtcaacccacaatacaacccacagacgccagggacgccggccatg
tacaacacagaccagttctctccctatgctgccccctccccacaaggttcctaccagccc
agccccagcccccagagctaccaccaggtggcgccaagcccagcaggctaccagaatacc
cactccccggccagctaccaccctacaccgtcgcccatggcctatcaggctagccccagc
ccgagccccgttggctacagtcctatgacacctggagctccctcccctggtggctacaac
ccacacacgccaggctcaggcatcgagcagaactccagcgactgggtaaccactgacatt
caggtgaaggtgcgggacacctacctggatacacaggtggtgggacagacaggtgtcatc
cgcagtgtcacggggggcatgtgctctgtgtacctgaaggacagtgagaaggttgtcagc
atttccagtgagcacctggagcctatcacccccaccaagaacaacaaggtgaaagtgatc
ctgggcgaggatcgggaagccacgggcgtcctactgagcattgatggtgaggatggcatt
gtccgtatggaccttgatgagcagctcaagatcctcaacctccgcttcctggggaagctc
ctggaagcttga
DBGET
integrated database retrieval system
