Pan paniscus (bonobo): 100971961
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Entry
100971961 CDS
T02283
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100971961 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100971961 (PATL1)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100971961 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
100971961 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
100971961
NCBI-ProteinID:
XP_003826409
Ensembl:
ENSPPAG00000034275
UniProt:
A0A2R9AYS4
LinkDB
All DBs
Position
9:complement(60767146..60801732)
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AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDDRKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVSITSLLRQLM
NLPQSAATPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggactgggagaagaagatgaagagattgatcaattcaatgacgatacatttgggtcaggc
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctattatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagt
ctgaattccagtatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgctttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgagcattaccaaggcggtcaacttcacct
atcattggcagtcctcctgttagagctgtccccataggcaccccacctaaacagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctccgctacaccacctccacagcagcaccctcctggcccaggaccccacctg
caaaacctaagatctcaggccccaatgtttagaccggacacaactcaccttcatccacag
caccgtcgactcttgcatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcgggagatagaggaagtcaccggagcagtcatcaagatcatctccgaaaggatcca
tatgccaatctcatgttgcagcgggaaaaggattgggtctctaaaatccagatgatgcaa
ctgcaaagcactgatccctatctggatgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaaatacaaggtgatggccctaagaaggagcgcaccaag
cttatcacccctcaggtggccaaactggagcacgcctataagccagtgcaatttgagggc
tctttgggaaagcttaccgtttctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacaaaagaaaaacaagttcgcgacaagaggaga
aaaacccttgttataattgagaaaacctacagcttactccttgacgtggaggactatgaa
agacgttatctcctaagtctggaagaagagcgacctgccctaatggatgacagaaagcac
aaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggcctagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctccttctctatcatcttccatcagtgagtatcaccagccttttgcgacagctaatg
aacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctcctcatcctcctgagccgtggtgaagacctacag
agttcagaccctgctacagaatcaacacaaaataatcagtggacggaggtgatgttcatg
gcaacacgagaacttctacggattccccaagcagccctggccaagccagtctctatacct
acaaacctagtgtccctcttttctcgctatgttgaccggcagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgataa
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