KEGG   Pan paniscus (bonobo): 100973165
Entry
100973165         CDS       T02283                                 
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:pps00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100973165
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pps00536]
    100973165
Glycosaminoglycan binding proteins [BR:pps00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100973165
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100973165
NCBI-ProteinID: XP_008967170
Ensembl: ENSPPAG00000043840
LinkDB
Position
8:82027140..82114312
AA seq 614 aa
MPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGD
MGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQG
PPGPPGPPGPSGPLGHPGLPGPMGPPGLPGSPGPKGDPGIQGYHGRKGERGMPGMPGKHG
AKGAPGIAVAGMKGEPGIPGTKGDPGAEGKPGPPGLLGKRGQRGEKGAEGSPGLPGLLGQ
KGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRPGDKGERGAAGEQGPD
GPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGL
PGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGS
PGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDR
GPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPP
GDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGHRGFKGEKGEPGLPGLDGLDAPCP
LGEDGLPVQGCWNK
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggttcccccggagacgct
gggctgtccatcattggtccccgcggcccccctggtcaaccaggcactagaggtttccct
ggatttccgggtcccattgggctggacggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggaccccagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaggccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
gggcctatggggccacccggcttacctgggtctcctggaccaaagggagacccagggatc
cagggctaccatggccggaagggagaacggggcatgccagggatgccaggcaagcatgga
gccaagggggcgcccggaattgccgtggctgggatgaagggtgagccagggatcccagga
accaagggagacccaggagcagaagggaagccggggcccccaggtttgctgggaaagagg
gggcagaggggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcag
aagggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacctggccct
ccagggctccctgggcctccagggccaaagggagaagcaggtgtcgatggccaggttggc
cccccagggcggccaggagacaagggggagcgtggagcagctggagaacagggaccagat
ggccccaagggctccaagggagaaccggggaaaggagagatggtggattacaatggaaac
atcaatgaggctctccaggagatccggacgctggccttgatggggcctcctggtcttcct
gggcaaattggcccacctggagctccagggattccaggccagaagggggagattggactg
ccaggccctccaggacacgatggcgaaaagggacctcgtggtaaaccaggagacatgggc
cctcctggtccccaaggccccccaggaaaggatggacctccaggagtgaagggagaaaac
gggcacccagggagcccaggagagaagggggagaaaggggagacaggacaagcaggctca
ccgggagagaaaggagaagccggggagaagggcaacccaggagcagaggttcctgggctg
ccagggccagaggggcctcccggacctccggggctccaaggtgttcctggaccaaagggg
gaagcaggactagatggagcaaaaggagagaaaggcgtccagggagaaaaaggagaccgt
ggtcccctgggactacccggagcttcaggtttggacggcaggcctgggccaccgggtact
ccaggaccaattggagttccaggcccagcgggaccaaagggcgagaggggcagcaaagga
gaccctgggatgacaggaccaacgggagcagctgggcttcctggtttacatggaccaccc
ggggacaagggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggat
aagggagaccaaggagcgcctggattagatgccccctgcccattgggacaccgaggtttt
aaaggagagaaaggggagccggggttaccagggctggacggactggatgccccatgccca
ttgggcgaagatggcttaccagtccaaggctgctggaacaagtga

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