Pan paniscus (bonobo): 100973165
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Entry
100973165 CDS
T02283
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
pps
Pan paniscus (bonobo)
Pathway
pps04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100973165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pps00536
]
100973165
Glycosaminoglycan binding proteins [BR:
pps00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100973165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100973165
NCBI-ProteinID:
XP_008967170
Ensembl:
ENSPPAG00000043840
LinkDB
All DBs
Position
8:82027140..82114312
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AA seq
614 aa
AA seq
DB search
MPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGD
MGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQG
PPGPPGPPGPSGPLGHPGLPGPMGPPGLPGSPGPKGDPGIQGYHGRKGERGMPGMPGKHG
AKGAPGIAVAGMKGEPGIPGTKGDPGAEGKPGPPGLLGKRGQRGEKGAEGSPGLPGLLGQ
KGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRPGDKGERGAAGEQGPD
GPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGL
PGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGS
PGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDR
GPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPP
GDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGHRGFKGEKGEPGLPGLDGLDAPCP
LGEDGLPVQGCWNK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggttcccccggagacgct
gggctgtccatcattggtccccgcggcccccctggtcaaccaggcactagaggtttccct
ggatttccgggtcccattgggctggacggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggaccccagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaggccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
gggcctatggggccacccggcttacctgggtctcctggaccaaagggagacccagggatc
cagggctaccatggccggaagggagaacggggcatgccagggatgccaggcaagcatgga
gccaagggggcgcccggaattgccgtggctgggatgaagggtgagccagggatcccagga
accaagggagacccaggagcagaagggaagccggggcccccaggtttgctgggaaagagg
gggcagaggggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcag
aagggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacctggccct
ccagggctccctgggcctccagggccaaagggagaagcaggtgtcgatggccaggttggc
cccccagggcggccaggagacaagggggagcgtggagcagctggagaacagggaccagat
ggccccaagggctccaagggagaaccggggaaaggagagatggtggattacaatggaaac
atcaatgaggctctccaggagatccggacgctggccttgatggggcctcctggtcttcct
gggcaaattggcccacctggagctccagggattccaggccagaagggggagattggactg
ccaggccctccaggacacgatggcgaaaagggacctcgtggtaaaccaggagacatgggc
cctcctggtccccaaggccccccaggaaaggatggacctccaggagtgaagggagaaaac
gggcacccagggagcccaggagagaagggggagaaaggggagacaggacaagcaggctca
ccgggagagaaaggagaagccggggagaagggcaacccaggagcagaggttcctgggctg
ccagggccagaggggcctcccggacctccggggctccaaggtgttcctggaccaaagggg
gaagcaggactagatggagcaaaaggagagaaaggcgtccagggagaaaaaggagaccgt
ggtcccctgggactacccggagcttcaggtttggacggcaggcctgggccaccgggtact
ccaggaccaattggagttccaggcccagcgggaccaaagggcgagaggggcagcaaagga
gaccctgggatgacaggaccaacgggagcagctgggcttcctggtttacatggaccaccc
ggggacaagggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggat
aagggagaccaaggagcgcctggattagatgccccctgcccattgggacaccgaggtttt
aaaggagagaaaggggagccggggttaccagggctggacggactggatgccccatgccca
ttgggcgaagatggcttaccagtccaaggctgctggaacaagtga
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