Pan paniscus (bonobo): 100973216
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Entry
100973216 CDS
T02283
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100973216 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100973216 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100973216 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100973216 (ARID1B)
03021 Transcription machinery [BR:
pps03021
]
100973216 (ARID1B)
03036 Chromosome and associated proteins [BR:
pps03036
]
100973216 (ARID1B)
Transcription factors [BR:
pps03000
]
Eukaryotic type
Helix-turn-helix
ARID
100973216 (ARID1B)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100973216 (ARID1B)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100973216 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100973216
NCBI-ProteinID:
XP_034819019
Ensembl:
ENSPPAG00000029333
LinkDB
All DBs
Position
5:176787897..177224679
Genome browser
AA seq
2429 aa
AA seq
DB search
MAARAAAAAAAAARARARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAAAAPGPMLGG
GGDGGGGLNSVHHHPLLPRHELNMAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSS
SSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAH
HLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQH
GGAKDTAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG
GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS
MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGSGGGGGGGGVGAGAGGAGAGAV
AAAAAAAAAAAGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG
GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAA
AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLMQQERPSSLPVEVLASEDAAFGLKDLSGSIDDLPTGTEATL
SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP
ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP
HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGI
SANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP
TVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMV
HQPDQYGQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASMGL
ADMMSPGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSA
SISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFM
EERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS
LKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGS
NSMAEVPGDLKPPTPASTPHGQMTPLQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPY
QQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSN
LGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMY
GPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQT
HGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMM
VPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQ
RSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVL
KQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFL
ELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDD
DEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVV
DRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMQIPPRRRPPPPLSSAGRKKEQE
GKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLE
DEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLIL
LHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAY
TESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLIL
ATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLI
SFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEG
RLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcggcgcgggcgcgggcgcgggcaggc
agcggcgaacggcgggcgccccccgggccgcggccggcgcccggagcccgggacctggag
gcgggggcgcgcggcgcggcggcggcggcggcggcggcaccgggacccatgctggggggc
ggcggcgacggcggcggcggcctgaacagtgtgcaccaccaccccctgctcccccgtcac
gaactcaacatggcccataacgcgggcgccgcggccgccgccggcacccacagcgccaag
agcggcggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcc
tcctcctccgcggcggcagcggcggcgtcctcttcctcctcgtcgggcccgggctcggcc
atggagacggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcg
ccgccccaccagcagcaccaccaccaccaccatgcccaccaccaccaccaccatgcccac
cacctccaccaccaccacgcactacagcagcagctaaaccagttccagcagcagcagcag
cagcagcagcaacagcagcagcagcagcagcagcaacatcccatttccaacaacaacagc
ttgggcggcgcgggcggcggcgcgcctcagcccggccccgacatggagcagccgcaacat
ggaggcgccaaggacactgccgcgggcggccaggccgaccccccgggcccgccgctgctg
agcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggcggccgc
tacgagcacccgggcctgggcgccctgggcacgcagcagccgccggtcgccgtgcccggg
ggcggcggcggcccggcggccgtcccggagtttaataattactatggcagcgctgcccct
gcgagcggcggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaa
agccccgggatggggatgatgcactccgcctccgccgccgccgccggggcccccggcagc
atggaccccctgcagaactcccacgaagggtaccccaacagccagtgcaaccattatccg
ggctacagccggcccggcgcgggcggcggcggcggcggaggaggaggaggaggcagcgga
ggaggaggaggaggaggaggagttggagcaggagcaggaggagcaggagcgggagctgtg
gcggcggcggccgcggcggcggcagcagcagcaggaggcggcggcggcggctatgggggc
tcgtccgcggggtacggggtgctgagctccccccggcagcagggcggcggcatgatgatg
ggccccgggggcggcggggccgcgagcctcagcaaggcggccgccggctcggcggcgggg
ggcttccagcgcttcgccgggcagaaccagcacccgtcgggggccaccccgaccctcaat
cagctgctcacctcgcccagccccatgatgcggagctacggcggcagctaccccgagtac
agcagccccagcgcgccgccgccgccgccgtcgcagccccagtcccaggcggcggcggcg
gcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggcaag
gacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaaggagt
cacccggcgatgagccctggcacccccggaccgaccatgggcagatcccagggcagccca
atggatccaatggtgatgaagagacctcagttgtatggcatgggcagtaaccctcattct
cagcctcagcagagcagtccgtacccaggaggttcctatggccctccaggcccacagcgg
tatccaattggcatccagggtcggactcccggggccatgggcggaatgcagtaccctcag
cagcagatgccacctcagtatggacagcaaggtgtgagtggttactgccagcagggccaa
cagccatattacagccagcagccgcagcccccgcacctcccaccccaggcgcagtatctg
ccgtcccagtcccagcagaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actagatctcaacctcctctggcccccggaaaacctaaccatgaagacttgaacttaatg
caacaagaaagaccatcaagtttaccagttgaagtcttggcctcggaggatgcagccttt
ggactcaaggatctgtctggctccattgatgacctccccacgggaacggaagcaactttg
agctcagcagtcagtgcatccgggtccacgagcagccaaggggatcagagcaacccggcg
cagtcgcctttctccccacatgcgtcccctcatctctccagcatcccggggggcccatct
ccctctcctgttggctctcctgtaggaagcaaccagtctcgatctggcccaatctctcct
gcaagtatcccaggtagtcagatgcctccacagccacccgggagccagtcagaatccagt
tcccatcccgccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcaca
caaagaaaccctcagatggctcagtatggacctcaacagacaggaccatccatgtcgcct
catccttctcccgggggccagatgcatgctggaatcagtagctttcagcagagtaactca
agtgggacttacggtccacagatgagccagtatggaccacaaggtaactactccagaccc
ccagcgtatagtggggtgcccagtgcaagctacagcggcccagggcccggtatgggtatc
agtgccaacaaccagatgcatggacaagggccaagccagccatgtggtgctgtgcccctg
ggacgaatgccatcagctgggatgcagaacagaccatttcctggaaatatgagcagcatg
acccccagttctcctggcatgtctcagcagggagggccaggaatggggccgccaatgcca
actgtgaaccgtaaggcacaggaggcagccgcagcagtgatgcaggctgctgcgaactca
gcacaaagcaggccaccatacattaggtcgcctgcttatcccagccagtctggggctggc
ggacgccccatgttttcttcccagcaccccaactatggcaactctcaggctcccatggtg
caccagcctgaccagtacgggcaaggcagtttccccggcatgaaccagagtggacttatg
gcttccagctctccctacagccagcccatgaacaacagctctagcctgatgaacacgcag
gctccgccctacagcatggcgcccgccatggtgaacagctcggcagcatctatgggtctt
gcagatatgatgtctcctggtgaatccaaactgcccctgcctctcaaagcagacggcaaa
gaagaaggcactccacagcccgagagcaagtcaaaggatagctacagctctcagggtatt
tctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcccccagctctgct
agcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaag
actccatcaagccctaagtccagctcctccaccactactggggagaagatcacgaaggtg
tacgagctggggaatgagccagagagaaagctctgggtcgaccgatacctcaccttcatg
gaagagagaggctctcctgtctcgagtctgcctgctgtgggcaagaagcccctggacctg
ttccgactctacgtctgcgtcaaagagatcgggggtttggcccaggttaataaaaacaag
aagtggcgtgagctggcaaccaacctaaacgttggcacctcaagcagtgcagcgagctcc
ctgaaaaagcagtatattcagtacctgtttgcctttgagtgcaagatcgaacgtggggag
gagcccccgccggaagtcttcagcaccggggacaccaaaaagcagcccaagcttcagccg
ccatctcctgctaactcgggatccttgcaaggcccacagaccccccagtcaactggcagc
aattccatggcagaggttccaggtgacctgaagccacctaccccagcctccacccctcac
ggccagatgaccccattgcaaggtggaagaagcagtacaatcagtgtgcacgacccattc
tcagacgtgagtgattcatccttcccgaaacgaaactccatgactccaaacgccccctac
cagcagggcatgagcatgcccgatgtgatgggcaggatgccctatgagcccaacaaggac
ccctttgggggaatgagaaaagtgcctggaagcagcgagccctttatgacgcaaggacag
atgcccaacagcagcatgcaggacatgtacaaccaaagtccctccggagcaatgtctaac
ctgggcatggggcagcgccagcagtttccctatggagccagttacgaccgaaggcatgaa
ccttatgggcagcagtatccaggccaaggccctccctcgggacagccgccgtatggaggg
caccagcccggcctgtacccacagcagccgaattacaaacgccatatggacggcatgtac
gggcccccagccaagcgccacgagggcgacatgtacaacatgcagtacagcagccagcag
caggagatgtacaaccagtacggaggctcctactcgggcccggaccgcaggcccatccag
ggccagtacccgtatccctacagcagggagaggatgcagggcccggggcagatccagaca
cacggaatcccgcctcagatgatgggcggcccgctgcagtcgtcctccagtgaggggcct
cagcagaatatgtgggcagcacgcaatgatatgccttatccctaccagaacaggcagggc
cctggcggccctacacaggcgcccccttacccaggcatgaaccgcacggacgatatgatg
gtacccgatcagaggataaatcatgagagccagtggccttctcacgtcagccagcgtcag
ccttatatgtcgtcctcagcctccatgcagcccatcacacgcccaccacagccgtcctac
cagacgccaccgtcactgccaaatcacatctccagggcgcccagcccagcgtccttccag
cgctccctggagaaccgcatgtctccaagcaagtctccctttctgccgtctatgaagatg
cagaaggtcatgcccacggtccccacatcccaggtcaccgggccaccaccccaaccaccc
ccaatcagaagggagatcacctttcctcctggctcagtagaagcatcacaaccagtcttg
aaacaaaggcgaaagattacctccaaagatatcgttactcctgaggcgtggcgtgtgatg
atgtcccttaaatcaggtcttttggctgagagtacgtgggctttggacactattaatatt
cttctgtatgatgacagcactgttgctactttcaatctctcccagttgtctggatttctc
gaacttttagtcgagtactttagaaaatgcctgattgacatttttggaattcttatggaa
tatgaagtgggagaccccagccaaaaagcacttgaccacaacgcagcaaggaaggatgac
agccagtccttggcggacgattctgggaaagaggaggaagatgctgaatgtattgatgac
gacgaggaagacgaggaggatgaggaggaagacagcgagaagacagaaagcgatgaaaag
agcagcatcgctctgactgccccggacgccgctgcagacccaaaggagaagcccaagcaa
gccagtaagttcgacaagctgccaataaagatagtcaaaaagaacaacctgtttgttgtt
gaccgatctgacaagttggggcgtgtgcaggagttcaatagtggccttctgcactggcag
ctcggcgggggcgacaccaccgagcacattcagactcactttgagagcaagatgcaaatt
cctcctcgcaggcgcccacctccccccttaagctccgcaggtagaaagaaagagcaagaa
ggcaaaggcgactctgaagagcagcaagagaaaagcatcatagcaaccatcgatgacgtc
ctctctgctcggccaggggcattgcctgaagacgcaaaccctgggccccagaccgaaagc
agtaagtttccctttggtatccagcaagccaaaagtcaccggaacatcaagctgctggag
gacgagcccaggagccgagacgagactcctctgtgtaccatcgcgcactggcaggactcg
ctggctaagcgatgcatctgtgtgtccaatattgtccgtagcttgtcattcgtgcctggc
aatgatgccgaaatgtccaaacatccaggcctggtgctgatcctggggaagctgattctt
cttcaccacgagcatccagagagaaagcgagcaccgcagacctatgagaaagaggaggat
gaggacaagggggtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttg
agggataacacgttggtcacgttggccaacatttccgggcagctagacttgtctgcttac
acggaaagcatctgcttgccaattttggatggcttgctgcactggatggtgtgcccgtct
gcagaggcacaagatccctttccaactgtgggacccaactcggtcctgtcgcctcagaga
cttgtgctggagaccctctgtaaactcagtatccaggacaataatgtggacctgatcttg
gccactcctccatttagtcgtcaggagaaattctatgctacattagttaggtacgttggg
gatcgcaaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaa
ggggacgcactagcagcaagggccatagctgtgcagaaaggaagcattggaaacttgata
agcttcctagaggatggggtcacgatggcccagtaccagcagagccagcacaacctcatg
cacatgcagcccccgcccctggaaccacctagcgtagacatgatgtgcagggcggccaag
gctttgctagccatggccagagtggacgaaaaccgctcagaattccttttgcacgagggc
cggttgctggatatctcgatatcagctgtcctgaactctctggttgcatctgtcatctgt
gatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
