Entry |
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Symbol |
FXR1
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Name |
(RefSeq) RNA-binding protein FXR1 isoform X4
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KO |
K15516 | fragile X mental retardation protein |
|
Organism |
pps Pan paniscus (bonobo)
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Brite |
KEGG Orthology (KO) [BR:pps00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pps03019]
100973513 (FXR1)
Messenger RNA biogenesis [BR:pps03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100973513 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
100973513 (FXR1)
mRNA cycle factors
Stress granule specific factors
100973513 (FXR1)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
2:178783206..178848482
|
AA seq |
755 aa
MPELRGMPMRRAGCAWEVHSVAAGGTTRPPRCELRALWGGDLGAGQQRSGDCVWRQIRRR
RRQAEPKASDAGCAGIPPRESGRHVGTPGVKGGGSQSQPCFPLPFPRLLLAPPPSSPLVG
KFLESLPSGLCGSNMAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNE
VRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEI
VTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETT
QLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVR
EDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFI
QVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGN
VQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELS
NPSETESERKDELSDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSIS
SVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDT
ASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSA
SGDDISKLQRTPGEEKINTLKEENTQEAAVLNGVS |
NT seq |
2268 nt +upstreamnt +downstreamnt
atgccggagctcaggggaatgccgatgcgccgggcaggctgtgcctgggaagttcattct
gtggcagctggaggcactactcggccgccgcggtgcgaactgcgtgcactgtggggcggg
gacctaggggcgggtcaacaaaggtcgggcgattgtgtctggaggcaaatccgacgtaga
cggcggcaggcggagcccaaagccagtgatgcagggtgcgcagggatcccacctcgagag
tcggggcggcacgttgggaccccaggggtgaagggcgggggatcccaatcccagccctgt
tttcccctcccctttccccgcctccttctcgcccctcccccctcctcccctctggttgga
aagtttctagaatctcttcccagcggcctttgcggttccaacatggcggagctgacggtg
gaggttcgcggctctaacggggctttctacaagggatttatcaaagatgttcatgaagac
tcccttacagttgtttttgaaaataattggcaaccagaacgccaggttccatttaatgaa
gttagattaccaccaccacctgatataaaaaaagaaattagtgaaggagatgaagtagag
gtatattcaagagcaaatgaccaagagccatgtgggtggtggttggctaaagttcggatg
atgaaaggagaattttatgtcattgaatatgctgcttgtgacgctacttacaatgaaata
gtcacatttgaacgacttcggcctgtcaatcaaaataaaactgtcaaaaaaaataccttc
tttaaatgcacagtggatgttcctgaggatttgagagaggcgtgtgctaatgaaaatgca
cataaagattttaagaaagcagtaggagcatgcagaattttttaccatccggaaacaaca
cagctaatgatactgtctgccagtgaagcaactgtgaagagagtaaacatcttaagtgac
atgcatttgcgaagtattcgtacgaagttgatgcttatgtccagaaatgaagaggccact
aagcatttagaatgcacaaaacaacttgcagcagcttttcatgaggaatttgttgtgaga
gaagatttaatgggcctggcaataggaacacatggtagtaacatccagcaagctaggaag
gttcctggagttactgccattgagctagatgaagatactggaacattcagaatctacgga
gagagtgctgatgctgtaaaaaaggctagaggtttcttggaatttgtggaggattttatt
caggttcctaggaatctcgttggaaaagtaattggaaaaaatggcaaagttattcaagaa
atagtggacaaatctggtgtggttcgagtgagaattgaaggggacaatgaaaataaatta
cccagagaagacggtatggttccatttgtatttgttggcactaaagaaagcattggaaat
gtgcaggttcttctagagtatcatattgcctatctaaaggaagtagaacagctaagaatg
gaacgcctacagattgatgaacagctgcgacagattggttctaggtcttatagcggaaga
ggcagaggtcgtcggggacctaattacacctccggttatggtacaaattctgagctgtct
aacccctctgaaacggaatctgagcgtaaagacgagctgagtgattggtcattggcagga
gaagatgatcgagacagccgacatcagcgtgacagcaggagacgcccaggaggaagaggc
agaagtgtttcagggggtcgaggtcgtggtggaccacgtggtggcaaatcctccatcagt
tctgtgctcaaagatccagacagcaatccatacagcttacttgataatacagaatcagat
cagactgcagacactgatgccagcgaatctcatcacagtactaaccgtcgtaggcggtct
cgtagacgaaggactgatgaagatgctgttctgatggatggaatgactgaatctgataca
gcttcagttaatgaaaatgggctagtcacagttgcagattatatttctagagctgagtct
cagagcagacaaagaaacctcccaagggaaactttggctaaaaacaagaaagaaatggca
aaagatgtgattgaagagcatggtccttcagaaaaggcaataaacggcccaactagtgct
tctggcgatgacatttctaagctacagcgtactccaggagaagaaaagattaatacctta
aaagaagaaaacactcaagaagcagcagtcctgaatggtgtttcataa |