Pan paniscus (bonobo): 100974440
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Entry
100974440 CDS
T02283
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100974440 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pps03041
]
100974440 (PRPF40A)
Spliceosome [BR:
pps03041
]
Complex A
U1 snRNP components
U1 related factors
100974440 (PRPF40A)
Complex B
100974440 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
100974440
NCBI-ProteinID:
XP_024783645
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All DBs
Position
2B:complement(39955290..40017636)
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AA seq
976 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSGSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANANASTSTSNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVA
IISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPI
ELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH
HRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRH
KSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatggtgagtgaaatggagagccatcctccctcgcagggt
cctggggacggggagcggagattgtccggctcaagcctctgctccggctcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatg
ccgcagatgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcg
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatcaatg
tggactgaacataaatcacctgatggaaggacttactactacaacactgaaaccaaacag
tctacctgggagaaaccagatgatcttaaaacacctgctgagcaactcttatctaaatgc
ccctggaaggaatacaaatcagattctggaaagccttactattataattctcaaacaaaa
gaatctcgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagc
agtaagcaagaagagtgcaccacaacatcaacagccccagtccctacaacagaaattccg
accacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagcg
gcggcagcagcagcagcagctgcagccaatgctaatgcttccacttctacttctaatact
gtcagtggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgtt
gtagataatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacc
cctgctattcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatctaag
caagaaactgtagctgattttactcccaaaaaagaagaggaggagagccaaccagcaaag
aaaacatacacttggaatacaaaggaagaggcaaagcaagcttttaaagaattattgaaa
gaaaagcgggtaccatcgaatgcttcatgggagcaggctatgaaaatgattattaatgat
ccacgatacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatgcctataaa
gtccagacagaaaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaaggaa
tcctttcagcgttttcttgaaaatcatgagaaaatgacttctacaaccagatacaaaaaa
gcagagcaaatgtttggagagatggaagtttggaatgcaatatcagaacgtgatcgtctt
gaaatctatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcag
ttgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaaca
tactctaccacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaa
gatgaggagttacaaaatatggacaaagaagatgcattaatttgctttgaagaacacatt
cgggctttagaaaaggaggaagaagaagaaaaacagaagagtttgctgagagaaaggaga
cgacagcgaaaaaatagggaatctttccagatatttttagatgaattacatgaacatgga
caactacattctatgtcatcttggatggaattgtatccaactattagttctgatattaga
ttcactaatatgcttggtcagcctgttttttcattaggatcaactgcacttgatcttttc
aagttttatgttgaggatcttaaagcacgttatcatgacgagaagaagataataaaagac
attctaaaggataaaggatttgtagttgaagtaaatactacttttgaagattttgtggcg
ataatcagttcaactaaaagatcaactacattagatgctggaaatattaaattggctttc
aatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaagaggctcgg
aagatgaaacgaaaagaatctgcatttaagagtatgttaaaacaagctgctcctccgata
gaattggatgctgtctgggaagatatccgtgagagatttgtaaaagagccagcatttgag
gacataactctagaatctgaaagaaaacgaatatttaaagattttatgcatgtgcttgag
catgaatgtcagcatcatcattcaaagaacaagaaacattctaagaaatctaaaaaacat
cataggaaacgttcccgctctcgatcggggtcagattcagatgatgatgatagccattca
aagaaaaaaagacaacgatcagagtctcgttctgcttcagaacattcttctagtgcagag
tctgagagaagttataaaaagtcaaaaaagcataagaagaaaagtaagaagaggagacat
aaatctgactctccagaatccgatgctgagcgagagaaggataaaaaagaaaaagatcgg
gaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcgcctaagaaa
aagactggaaaggattctggtaattgggatacttctggcagcgaactgagtgaaggggaa
ttggaaaagcgcagaagaacccttttggagcaactggatgatgatcaataa
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