Pan paniscus (bonobo): 100975131
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Entry
100975131 CDS
T02283
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100975131 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100975131 (CSTF1)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100975131 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
CSTF1_dimer
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
VPS8_N
Ge1_WD40
Frtz
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
100975131
NCBI-ProteinID:
XP_003806194
Ensembl:
ENSPPAG00000037866
UniProt:
A0A2R9BSV4
LinkDB
All DBs
Position
21:62139439..62151380
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AA seq
431 aa
AA seq
DB search
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaaccaaagtgggcttgaaggaccgccagcagctctacaagctgatcattagc
cagctgctatatgacggctacatcagcatcgccaatggcctcatcaatgaaatcaagcct
cagtctgtgtgtgcaccctcggagcagctcctgcatctcatcaaactaggaatggaaaat
gatgataccgcagttcagtatgcaattggtcgttcagatactgttgcccctggcacaggg
attgacctggaatttgatgcagatgttcagactatgtccccagaggcttctgagtacgaa
acatgctatgtcacatcacataaaggaccatgccgtgtagctacctatagtagagatgga
cagttaatagctactgggtctgctgatgcttcgataaagatacttgacacagagaggatg
ttggccaaaagtgccatgccaatagaggtcatgatgaatgagaccgcacaacaaaatatg
gaaaaccacccagtgattcgaactctttatgaccatgtggatgaagtcacgtgcctcgct
ttccacccaacagaacagatcctggcttctggttcaagggattatactcttaaattattt
gattattccaaaccatcagcaaaaagagccttcaaatacattcaggaagctgaaatgtta
cgttccatctcttttcatccttctggagactttatacttgtcggaactcagcatcctact
cttcgcctttatgatatcaacacctttcaatgttttgtctcttgcaatcctcaagatcaa
cacaccgatgctatatgttccgttaattacaattctagtgccaatatgtacgtaactgga
agcaaggatggctgcatcaaattatgggatggtgtttcaaatcgatgcatcacgactttt
gagaaagcacatgacggtgctgaagtttgttctgccattttttccaaaaattctaaatac
attctctcaagtggaaaagactctgtagctaaactttgggaaatatcaacaggacgaaca
ctggtcagatacacgggcgcgggtttaagtggacgccaggtgcaccggacacaggctgtg
tttaaccacaccgaggactatgtgttgctgcccgacgagaggacgatcagtctttgctgc
tgggactcgaggacagccgagcggagaaacctgctgtctttggggcacaacaatattgta
cgctgcatagtgcactcccccaccaaccccggcttcatgacgtgcagcgatgacttcaga
gcgcggttttggtaccggagatcgaccaccgactga
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