Pan paniscus (bonobo): 100975870
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Entry
100975870 CDS
T02283
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100975870 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100975870 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100975870 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100975870 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pps03036
]
100975870 (SMARCA4)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100975870 (SMARCA4)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100975870 (SMARCA4)
Chromatin remodeling factors
BAF complex
100975870 (SMARCA4)
PBAF complex
100975870 (SMARCA4)
GBAF(ncBAF) complex
100975870 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
NirdL-like_HTH
DUF2009
Motif
Other DBs
NCBI-GeneID:
100975870
NCBI-ProteinID:
XP_034801671
Ensembl:
ENSPPAG00000043191
LinkDB
All DBs
Position
20:15881885..15982873
Genome browser
AA seq
1759 aa
AA seq
DB search
MGASEDLICVMLLVRSLSRAKQLLSKPGERWGTLVSPAERPALPASSRPFAQARVQWCGH
GSLQPQPPGLSRRPLSAAPVKMSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSA
HSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMR
SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP
QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT
LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGG
PPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQP
APMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTK
ATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQ
QKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKEN
ERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKE
KKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQL
EAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVS
EVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQI
KGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWA
YEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMI
VDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTF
EQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCD
MSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESF
SEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYR
GFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWN
PHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS
SHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDD
ETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTC
EEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTR
ASKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPP
AEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFK
KIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKED
DSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD
DDSEEEQEEDRSGSGSEED
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatctgaggacctcatctgtgtgatgctcctagtgcgatccctttcacgtgct
aagcagctgctcagtaaacctggggagagatggggcaccttggtttcaccagctgagcgg
ccggcacttcctgcctcgtctcgcccttttgcccaggctagagtgcagtggtgcggtcat
ggttcactgcagcctcaacctcctggactcagcaggaggccactgtctgcagctcccgtg
aagatgtccactccagacccacccctgggcggaactcctcggccgggtccttccccgggc
cctggcccttcccctggagccatgctgggccctagcccgggtccctcgccgggctccgcc
cacagcatgatggggcccagcccagggccgccctcagcaggacaccccatccccacccag
gggcctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccatg
cacgagaagggcatgtcggacgacccgcgctacaaccagatgaaaggaatggggatgcgg
tcagggggccatgctgggatggggcccccgcccagccccatggaccagcactcccaaggt
tacccctcgcccctgggtggctctgagcatgcctctagtccagttccagccagtggcccg
tcttcggggccccagatgtcttccggaccaggaggtgccccgctggatggtgctgacccc
caggccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccag
ctcagagctcagatcatggcctacaagatgctggccagggggcagcccctccccgaccac
ctgcagatggcggtgcagggcaagcggccaatgcccgggatgcagcagcagatgccaacg
ctacctccaccctcggtgtccgcaacaggacccggccctggccctggccctggccccggc
ccgggtcccggcccggcacctccaaattacagcaggcctcatggtatgggagggcccaac
atgcctcccccaggaccctcaggcgtgccccccgggatgccaggccagcctcctggaggg
cctcccaagccctggcctgaaggacccatggcgaatgctgctgcccccacgagcacccct
cagaagctgattcccccgcagccaacgggccgcccttcccccgcgccccctgctgtccca
cccgccgcctcgcccgtgatgccaccgcagacccagtcccccgggcagccggcccagccc
gcgcccatggtgccactgcaccagaagcagagccgcatcacccccatccagaagccgcgg
ggcctcgaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgcatcgca
caccgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaa
gcgaccattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccaggag
gtggtggtgtgcatgcggagggacacagcgctggagacagccctcaatgctaaggcctac
aagcgcagcaagcgccagtccctgcgcgaggcccgcatcactgagaagctggagaagcag
cagaagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaatagcatt
ctccagcatgccaaggatttcaaggaatatcacagatccgtcacaggcaaaatccagaag
ctgaccaaggcagtggccacgtaccacgccaacacggagcgggagcagaagaaagagaac
gagcggatcgagaaggagcgcatgcggaggctcatggctgaagatgaggaggggtaccgc
aagctcatcgaccagaagaaggacaagcgcctggcctacctcttgcagcagacagacgag
tacgtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggag
aaaaagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgccatc
ggaccggatggcgagcctctggacgagaccagccagatgagcgacctcccggtgaaggtg
atccacgtggagagtgggaagatcctcacaggcacagatgcccccaaagccgggcagctg
gaggcctggctcgagatgaacccggggtatgaagtagctccgaggtctgatagtgaagaa
agtggctcagaagaagaggaagaggaggaggaggaagagcagccgcaggcagcgcagcct
cccaccctgcccgtggaggagaagaagaagattccagatccagacagcgatgacgtctct
gaggtggacgcgcggcacatcattgagaatgccaagcaagatgtcgatgatgaatatggc
gtgtcccaggcccttgcacgtggcctgcagtcctactatgccgtggcccatgctgtcact
gagagagtggacaagcagtcagcgcttatggtcaatggtgtcctcaaacagtaccagatc
aaaggtttggagtggctggtgtccctgtacaacaacaacctgaacggcatcctggccgac
gagatgggcctggggaagaccatccagaccattgctctcatcacgtacctcatggagcac
aaacgcatcaatgggcccttcctcatcatcgtgcctctctcaacgctgtccaactgggcg
tacgagtttgacaagtgggccccctccgtggtgaaggtgtcttacaagggatccccagca
gcaagacgggcctttgtcccccagctccggagtgggaagttcaacgtcttgctgacgacg
tacgagtacatcatcaaagacaagcacatcctcgccaagatccgttggaagtacatgatt
gtggacgaaggtcaccgcatgaagaaccaccactgcaagctgacgcaggtgctcaacacg
cactatgtggcaccccgccgcctgctgctgacgggcacaccgctgcagaacaagcttccc
gagctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttc
gagcagtggtttaatgcaccctttgccatgaccggggaaaaggtggacctgaatgaggag
gaaaccattctcatcatccggcgtctccacaaagtgctgcggcccttcttgctccgacga
ctcaagaaggaagtcgaggcccagttgcccgaaaaggtggagtacgtcatcaagtgcgac
atgtctgcgctgcagcgagtgctctaccgccacatgcaggccaagggcgtgctgctgact
gatggctccgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatc
atgcagctgcggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttt
tctgagcacttggggttcactggcggcattgtccaagggctggacctgtaccgagcctcg
ggtaaatttgagcttcttgatagaattcttcccaaactccgagcaaccaaccacaaagtg
ctgctgttctgccaaatgacctccctcatgaccatcatggaagattactttgcgtatcgc
ggctttaaatacctcaggcttgatggaaccacgaaggcggaggaccggggcatgctgctg
aaaaccttcaacgagcccggctccgagtacttcatcttcctgctcagcacccgggctggg
gggctcggcctgaacctccagtctgcagacactgtgatcattttcgacagcgactggaat
cctcaccaggacctgcaagcgcaggaccgagcccaccgcatcgggcagcagaacgaggtg
cgtgtgctccgcctctgcaccgtcaacagcgtggaggagaagatcctagctgcagccaag
tacaagctcaacgtggaccagaaggtgatccaggccggcatgttcgaccagaagtcctcc
agccacgagcggcgcgccttcctgcaggccatcctggagcacgaggagcaggacgagagc
agacactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcg
ggcgtcaaccccgacttggaggagccacctctaaaggaggaagacgaggtgcccgacgac
gagaccgtcaaccagatgatcgcccggcacgaggaggagtttgatctgttcatgcgcatg
gacctggaccgcaggcgcgaggaggcccgcaaccccaagcgcaagccgcgcctcatggag
gaggacgagctcccctcgtggatcatcaaggacgacgcggaggtggagcggctgacctgt
gaggaggaggaggagaagatgttcggccgtggctcccgccaccgcaaggaggtggactac
agcgactcactgacggagaagcagtggctcaagaaaattacaggaaaagatatccatgac
acagccagcagtgtggcacgtgggctacaattccagcgtggccttcagttctgcacacgt
gcgtcaaaggccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaag
aaatcatcacggaagcgcaagcgagacagcgacgccggctcctccaccccgaccaccagc
acccgcagccgcgacaaggatgacgagagcaagaagcagaagaagcgcgggcggccgcct
gccgagaaactctcccctaacccacccaacctcaccaagaagatgaagaagattgtggat
gccgtgatcaagtacaaggacagcagtggacgtcagctcagcgaggtcttcatccagctg
ccctcacgaaaggagctgcccgagtactacgagctcatccgcaagcccgtggacttcaag
aagataaaggagcgcattcgcaaccacaagtaccgcagcctcaacgacctagagaaggac
gtcatgctcctgtgccagaacgcacagaccttcaacctggagggctccctgatctatgaa
gactccatcgtcttgcagtcggtcttcaccagcgtgcggcagaaaatcgagaaggaggat
gacagtgaaggcgaggagagtgaggaggaggaagagggcgaggaggaaggctccgaatcc
gaatctcggtccgtcaaagtgaagatcaagcttggccggaaggagaaggcacaggaccgg
ctgaagggcggccggcggcggccgagccgagggtcccgagccaagccggtcgtgagtgat
gacgacagtgaggaggaacaagaggaggaccgctcaggaagtggcagcgaagaagactga
DBGET
integrated database retrieval system
