Pan paniscus (bonobo): 100976291
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Entry
100976291 CDS
T02283
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100976291 (RC3H1)
04121 Ubiquitin system [BR:
pps04121
]
100976291 (RC3H1)
Transcription factors [BR:
pps03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100976291 (RC3H1)
Ubiquitin system [BR:
pps04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100976291 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100976291
NCBI-ProteinID:
XP_034796870
Ensembl:
ENSPPAG00000039253
UniProt:
A0A2R9BT06
LinkDB
All DBs
Position
1:75698811..75794508
Genome browser
AA seq
1134 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPSRKPPALPNGIVSTGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQ
QYPPIYPSHYDGRRVYPAPSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYP
VAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLT
LTFSSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcctattactttgtgtagtggggttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactcta
gtccactgtcaactcgtggaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagtaagggctaggggatgccagttccttggaccagcaatgcag
gaggaagctttaaagttggttctgctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacacgactcccagatagtgcagattgctatggaagcaggcttacgaattgcaccg
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagactccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatggg
ctggttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaataagcgcctggttccgagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctatccttccagatgaa
ggtgcagtggatctccctagcagaaaacctcctgctctgccaaatggaattgtatcaaca
gggaatacagtaacacagcttattccgcgagggacagaccccagctatgattctagtctg
aaaccaggaaaaatagatcatctgagcagtagtgctcctggatcccctcctgacctgcta
gaatctgttcctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccagcagatctgcctccaatgcctgttaccaaaccacttcagatggtacctcgaggt
tctcagttatatccagcacaacagacggatgtttattatcaggatcctcgaggagcggct
ccgccatttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatctgctcctgaacctgctcctccctacttggat
cattatccaccctacctccaagaacgtgttgtaaactctcagtatggcacacagccacag
cagtacccacctatatacccatctcactatgatggccgtcgagtgtaccctgctccgtct
tacacaagagaagagatattccgagaaagccctatacccattgagattccacctgcagca
gtaccatcgtatgtaccagaatccagagaaagataccaacagatcgagagttactatcca
gtggctcctcatccaactcagatcagaccttcgtacctcagagaacctccttatagccgg
cttcctcctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaa
ataatggcccagctagaggaaagaaaggttatctctccacctccttttgcaccttcacca
accttgcctcctacctttcatccggaagaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccaatactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagggaccagcgattagatcttcagagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggt
gccatctcacgaacttccaaaactatatatcagggtgctggtccaatgcaggctatggca
cctcagggagctcctacaaaatctattaacatttcagattatagtccatatggaacccac
ggtggctggggagcttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagagaacagctacgactagaattgcagcaattgaaccatcagattagccagcag
acccagctacgtggactagaggctgttagtaacaggctggtgttgcagagggaggcaaac
accctggcaggccagtcacagcccccaccaccgccacctccaaaatggcctgggatgatc
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaaca
cgggaactgagtatggaaaaccagtgttctctggacatgaaaagcaaactgaatacaagt
aaacaagcagaaaatggacaaccagaaccacaaaacaaggttccggctgaggaccttaca
ttgacattcagcagtgatgtaccaaatggatcagccttgacacaagagaatatcagcctc
ctatcaaacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggataat
aatgactcccagagatcaggagttactcccagttctgctccttaa
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integrated database retrieval system
