Pan paniscus (bonobo): 100976295
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Entry
100976295 CDS
T02283
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X8
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100976295 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100976295 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100976295 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100976295 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pps03036
]
100976295 (SMARCC2)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100976295 (SMARCC2)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100976295 (SMARCC2)
PBAF complex
100976295 (SMARCC2)
GBAF(ncBAF) complex
100976295 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
100976295
NCBI-ProteinID:
XP_003824977
Ensembl:
ENSPPAG00000028275
LinkDB
All DBs
Position
10:38142883..38170078
Genome browser
AA seq
1130 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGMVTPVPPPQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtctctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctggatttcaaagcgggaggctccttgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgtttatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacatggatcccagcgagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagcgaagaagaaaaatgctaagaaaggtccc
tcaacaccttatactaagtcaaagcgtggccacagagaagaggagcaagaagacctgaca
aaggacatggacgagccctcaccagtccccaatgtagaagaggtgacacttcccaaaaca
gtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgactgacctg
gatgaacaggaagatgaaagcatggagacgacgggcaaggatgaggatgagaacagtacg
gggaacaagggagagcagaccaagaatccagacctgcatgaggacaatgtgactgaacag
acccaccacatcatcattcccagctacgctgcctggtttgactacaatagcgttcatgcc
attgagcggagggctctccctgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagaatat
cttacctctaccgcctgccgccgaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg
ctggtgcctctgcagcccaagacacctcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaacca
acagacatgcaaaactttgggctgcgcacagacatgtacacaaaaaagaatgttccctcc
aagagcaaggctgcagccagtgccactcgtgagtggacagaacaggaaaccctgcttctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtccgagcatgtgggaagc
cgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg
gaggactcagaggcctccctaggccccctggcctaccaacccatccccttcagtcagtcg
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatccccgagtcgcc
tctgctgctgcaaagtcagccctagaggagttctccaaaatgaaggaagaggtacccacg
gccttggtggaggcccatgttcgaaaagtggaagaagcagccaaagtaacaggcaaggcg
gaccctgccttcggtctggaaagcagtggcattgcaggaaccacctctgatgagcctgag
cggattgaggagagcgggaatgacgaggctcgggtggaaggccaggccacagatgagaag
aaggagcccaaggaaccccgagaaggagggggtgctatagaggaggaagcaaaagagaaa
accagcgaggctcccaagaaggatgaggagaaagggaaagaaggcgacagtgagaaggag
tccgagaagagtgatggagacccaatagtcgatcctgagaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtctgagggggaaaggaagacaaaggtg
gagcgggacattggcgagggcaacctctccaccgctgctgccgccgccctggccgccgcc
gcagtgaaagccaagcacttggctgctgttgaggaaaggaagatcaaatctttggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaacttcggcactttgaggagctg
gagactatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacagatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatccccccgacaggggctgctgggccacccgcagtccatggcttggctgtggct
ccagcctctgtagtccctgctcctgctggcagtggggcccctccaggaagcttgggccct
tctgaacagattgggcaggcagggtcaactgcagggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggttcccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcggacccaggcacccccctgcctccagaccccacagccccgagccca
ggcatggtcacccctgtgccacctccacagtga
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integrated database retrieval system
