Pan paniscus (bonobo): 100976703
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Entry
100976703 CDS
T02283
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pps03009
]
100976703 (DDX56)
Enzymes [BR:
pps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100976703 (DDX56)
Ribosome biogenesis [BR:
pps03009
]
Eukaryotic type
Pre-60S particles
Helicases
100976703 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
100976703
NCBI-ProteinID:
XP_003846141
Ensembl:
ENSPPAG00000029147
LinkDB
All DBs
Position
6:complement(49478277..49486457)
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AA seq
547 aa
AA seq
DB search
MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSA
AEDSVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELILHNPVTLKLQESQLPGPDQLQQFQVICET
EEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEVLGAPVKGKRRGRGPKGDKASDLEAGVARGIDFHHVSAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQFHLGKIEELLSGENRGPILLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPPALRGLVRPHKKRKKLSSSCRKAKRAKSQNPLRSFKHKGKKF
RPTAKPS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctgaagcactgggcttcgaacacatgggcctcgatccccggctccttcag
gctgtcaccgatctgggctggtcgcgacctacgctgatccaggagaaggccatcccactg
gccctagaagggaaggacctcctggctcgggcccgcacgggctccgggaagacggccgct
tatgctattccgatgctgcagctgttgctccataggaaggcgacaggtccggtggtagaa
caggcagtgagaggccttgttcttgttcctaccaaggagctggcacggcaagcacagtcc
atgattcagcagctggctacctactgtgctcgggatgtccgagtggccaatgtctcagct
gctgaagactcagtctctcagagagctgtgctgatggagaagccagatgtggtagtgggg
accccatctcgcatattaagccacttgcagcaagacagcctgaaacttcgtgactccctg
gagcttttggtggtggacgaagctgatcttcttttttcctttggctttgaagaagagctc
aagagtctcctctgtcacttgccccggatttaccaggcttttctcatgtcagctactttt
aacgaggacgtacaagcactcaaggagctgatattacataacccggttacccttaagtta
caggagtcccagctgcctgggccagaccagttacagcagtttcaggtgatctgtgagact
gaggaagacaaattcctcctgctgtatgccctgctcaagctgtcattgattcggggcaag
tctctgctctttgtcaacactctagaacggagttaccggctacgcctgttcttggaacag
ttcagcatccccacctgtgtgctcaatggagagcttccactgcgctccaggtgccacatc
atctcacagttcaaccaaggcttctacgactgtgtcatagcaactgatgctgaagtcctg
ggggccccagtcaagggcaagcgtcggggccgagggcccaaaggggacaaggcctccgat
ctggaggcaggtgtggcccggggcatagacttccaccatgtgtctgctgtgctcaacttt
gatcttcccccaacccctgaggcctacatccatcgagctggcaggacagcacgcgctaac
aacccaggcatagtcttaacctttgtgctgcccacggagcagttccacttaggcaagatt
gaggagcttctcagtggagagaacaggggccccattctgctcccctaccagttccggatg
gaggagatcgagggcttccgctatcgctgcagggatgccatgcgctcagtgactaagcag
gccattcgggaggcaagattgaaggagatcaaggaagagcttctgcattctgagaagctt
aagacatactttgaagacaaccctagggacctccagctgctgcggcatgacctacctttg
caccccgcagtggtgaagccccacctgggccatgttcctgactacctggttcctcctgct
ctccgtggcctggtgcgccctcacaagaagcggaagaagctgtcttcctcttgtaggaag
gccaagagagcgaagtcccagaacccactgcgcagcttcaagcacaaaggaaagaaattc
agacccacagccaagccctcctga
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