Pan paniscus (bonobo): 100977104
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Entry
100977104 CDS
T02283
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100977104 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pps03009
]
100977104 (TCOF1)
Ribosome biogenesis [BR:
pps03009
]
Eukaryotic type
90S particles
Other 90S particles
100977104 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Gal-3-0_sulfotr
Motif
Other DBs
NCBI-GeneID:
100977104
NCBI-ProteinID:
XP_034816677
Ensembl:
ENSPPAG00000038092
LinkDB
All DBs
Position
4:145586237..145628634
Genome browser
AA seq
1525 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLRAGYVRAAREVKEQSGQKCFLAQPVTLLDIYTHWQQTSELG
RKRKAEEDAALQAKKTRVSDPISTSESSEEEEEAEAETAKATPRLASTNSSVLGADLPSS
MKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVL
AFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAP
APGKVGDVTPQVKGGALPPAKKAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQV
RAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL
QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSE
EEAPAQAKPSGKAPQVRAASAPAKESPRKGTAPAPPRKTGPAAAQVQVGKQEEDSGSSSE
ESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGK
WEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPASSPAKGPPQKAGPVAVQVK
AEKPMDNSESSEESSDSADSEEAPAVMTAAQAKPALKIPQTKACPKKTNTTASAKVAPVR
VGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGK
GLQVKAASVPLKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQ
VKTSVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQVKQRSPSKVKPPVRNPQNSTVL
ARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEVETLAQAKPSGKTPQIRAAL
APAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQKDSNSKP
ARSKTLAPAPPERNTEGSSESSEEELPLTQVIKPPLIFVDPNRSPAGPAATPAQAQAAST
PRKARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSS
KESSRISDGKKQEGPATQVSKKNPASLPLTQAALKVLAQKASEAQPPVARTQPSSGVDSA
VGTLPATSPQSSSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDAEGP
QGAKSAHTLGPTPSRTETLVEETAAESSEDDVVAPSQSLLSGYVTPGLTPANSQASKATP
KLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASSTTPQKSRKPKKGAGN
PQASTLALQSNIAQCLLGQPWPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWE
SRKRKLSGDQLAARTPRSKKKKKLGAREGGEASVSPEKTSTTSKGKAKRDKASGDVKEKK
GKGSLGSQGAKDEPEEELQKGMGKVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKAKK
ASTKDSESPSQKKKKKKKKTAEQTV
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcggcgggagctacttcccctgatctaccaccatctgctgcgg
gctggctatgtgcgtgcggcgcgggaagtgaaggagcagagcggccagaagtgtttcctg
gctcagcccgtaacccttctggacatctatacacactggcaacaaacctcagagcttggt
cggaagcggaaggcagaggaagatgcggcactgcaagctaagaaaacccgtgtgtcagac
cccatcagcacctcagagagctcggaagaggaggaggaagcagaagccgaaaccgccaaa
gccaccccaagactagcatctaccaactcctcagtcctgggggcggacttgccatcaagc
atgaaagaaaaagccaaggcagagacagagaaagctggcaagactgggaattccatgcca
caccctgccactgggaagacggtggccaaccttctttctgggaagtctcccaggaagtca
gcagagccctcagcaaatactacgttggtctcagaaactgaggaggagggcagcgtcctg
gcctttggagctgctgccaagcctgggatggtgtcagcgggccaggccgacagctccagc
gaggacacctccagctccagcgatgagacagacgtggaggggaaaccctcagtaaaacca
gcccaggtcaaagcctcatcagtttctactaaggagtctccagcaagaaaggcggcccca
gcccctgggaaggtgggggatgtgacaccccaggtcaaaggaggggccctgccgccagcc
aagaaggccaagaagccagaagaggagtcagagagtagtgaggagggatctgaaagtgag
gaggaggcccctgcagggacacgaagccaggtaaaggcctctgaaaaaattctccaggtc
agagctgcctcggcccctgccaaggggacccctgggaaaggggctaccccagcaccccct
gggaaggcaggagctgtagcctcccagaccaaggcagggaagccagaggaggactcagag
agcagcagcgaggagtcgtctgacagtgaggaggagacgccagctgccaaggccctgctt
caggcgaaggcctcaggaaaaacctctcaggtcggagctgcctcagcccctgccaaggag
tcccccaggaaaggagctgccccagcgccccctgggaagacagggcctgcagttgccaag
gcccaggcggggaagcgggaggaggactcgcagagcagcagtgaggaatcggacagtgag
gaggaggcgcctgctcaggcgaagccttcagggaaggccccccaagtcagagccgcctcg
gcccctgccaaggagtcccccaggaaagggactgccccagcacctcctaggaaaacaggg
cctgcagccgcccaggtccaggtggggaagcaggaggaggactcaggaagcagcagcgag
gagtcagacagtgacagagaggcactggcagccatgaatgcagctcaggtgaagcccttg
gggaaaagcccccaggtgaaacctgcctccaccatgggcatggggcccttggggaaaggc
gccggcccagtgccacctgggaaggtggggcctgcaaccccctcggcccaggtggggaag
tgggaggaggactcagagagcagtagtgaggagtcatcagacagcagtgatggagaggtg
cccacagctgtggccccggctcaggaaaagtccttggggaacatcctccaggccaaacct
gcctccagtcctgccaaggggccccctcagaaggcagggcctgtagccgtccaggtcaag
gctgaaaagcccatggacaactcggagagcagcgaggagtcgtcggacagtgcggacagt
gaggaggcaccagcagtcatgactgcagctcaggcaaaaccagctctgaaaattcctcag
accaaggcctgcccaaagaaaaccaataccactgcatctgccaaggtcgcccctgtgcga
gtgggcacccaagccccccggaaagcaggaactgcgacttctccagcaggctcatcccca
gctgtggctgggggcacccagagaccagcagaggattcttcaagcagtgaggaatcagat
agtgaggaagagaagacaggtcttgcagtaaccgtgggacaggcaaagtctgtggggaaa
ggcctccaggtgaaagcggcctcagtgcctctcaaggggtccttggggcaagggactgct
ccagtactccctgggaagacggggcctacagtcacccaggtgaaagctgaaaagcaggaa
gactctgagagcagtgaggaggagtcagacagtgaggaggcagctgcatctccagcacag
gtgaaaacctcagtaaagaaaacccaggccaaagccaacccagctgccgccagagcacct
tcagcaaaagggacaatttcagcccctggaaaagttgtcactgcagctgctcaagtcaaa
cagagatctccatccaaggtgaagccaccagtgagaaacccccagaacagtaccgtcttg
gcgaggggcccagcatctgtgccatctgtggggaaggccgtggctacagcagctcaggcc
cagacagggccagaggaggactcagggagcagtgaggaggagtcagacagtgaggaggag
gtggagacgctagctcaggcgaagccttcagggaagaccccccagatcagagctgccttg
gctcctgccaaggagtcccccaggaaaggggctgccccaacacctcctgggaagacaggg
ccttcggctgcccaggcggggaagcaggatgactcagggagcagcagcgaggaatcagac
agtgatggggaagcaccggcagctgtgacctctgcccagaaggacagtaactccaaacct
gccagaagcaagaccctggccccagcacccccagagaggaacacggaggggtcctcggag
agcagtgaggaagagctgccactgacccaggtgattaaaccccctctgatttttgtcgac
cctaatcgtagtccagctggcccagctgctacacccgcacaagcccaggctgcaagcacc
ccgaggaaggcccgagcctcggagagcacagccaggagctcctcctccgagagcgaggat
gaggacgtgatccccgctacacagtgcttgactcctggcatcagaaccaatgtggtgacc
atgcccactgcccacccaagaatagcccccaaagccagcatggctggggccagcagcagc
aaggagtccagtcggatatcagatggcaagaaacaggagggaccagccactcaggtgtca
aagaagaacccagcttccctcccactgacccaggctgccctgaaggtcctcgcccagaaa
gccagtgaggctcagcctcctgttgccaggacccagccttcaagtggggttgacagtgct
gtgggaacactccctgcaacaagtccccagagcagctccgtccaggccaaagggaccaac
aagctcagaaaacctaagcttcctgaggtccagcaggccaccaaagcccctgagagctca
gatgacagtgaggacagcagcgacagttcttcagggagtgaggaagatgctgaagggccc
cagggggccaagtcggcccacacgctgggtcccaccccctccaggacagagaccctggtg
gaggagaccgcagcagagtccagcgaggatgatgtggtggcgccatcccagtctctcctc
tcaggttatgtgacccctggactaaccccagccaattcccaggcctcaaaagccactccc
aagctagactccagcccctcagtttcctctactctggccgccaaagatgacccagatggc
aagcaggaggcaaagccccaacaggcagcaggcatgttgtcccctaaaacaggtggaaaa
gaggctgcttcaagcaccacacctcagaagtcccggaagcccaagaaaggggctgggaac
ccccaagcctcaaccctggcgctgcaaagcaacatcgcccagtgcctcctgggccaaccc
tggcccctgaatgaggcccaggtgcaggcctcagtggtgaaggtcctgactgagctgctg
gaacaggaaagaaagaaggtggtggacaccaccaaggagagcagcaggaagggctgggag
agccgcaagcgcaagctatcgggagaccagctggctgccaggacccccaggagcaagaag
aagaagaagctgggggccagggaaggtggggaggcctctgtttccccggaaaagacctcc
acgacttccaaggggaaagcaaagagagacaaagcgagtggtgatgtcaaggagaagaaa
gggaaggggtctcttggctcccaaggggccaaggacgagccagaagaggagcttcagaag
gggatggggaaggttgaaggtggagatcaaagcaacccaaagagcaagaaggagaagaag
aaatccgacaagagaaaaaaagacaaagaaaaaaaagaaaagaagaagaaagcaaaaaag
gcctcaaccaaagattctgagtcaccgtcccagaagaaaaagaagaaaaagaagaagaca
gcagagcagactgtatga
DBGET
integrated database retrieval system