KEGG   Pan paniscus (bonobo): 100977348
Entry
100977348         CDS       T02283                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X2
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03018  RNA degradation
pps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100977348 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100977348 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100977348 (LSM4)
   03041 Spliceosome [BR:pps03041]
    100977348 (LSM4)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100977348 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100977348 (LSM4)
Spliceosome [BR:pps03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100977348 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 100977348
NCBI-ProteinID: XP_003817824
Ensembl: ENSPPAG00000044045
UniProt: A0A2R9CTE0
LinkDB
Position
20:complement(23167478..23183873)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgctgaagacggctcagaatcaccccatgttggtggagctgaaa
aatggggagacgtacaatggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacgtccagggacggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgctggccgaggtgtgtttggtggccggggccgaggtgggatc
ccgggcacaggcagaggccagccagagaagaagcctggcagacaggcgggcaaacagtga

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