Pan paniscus (bonobo): 100977878
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Entry
100977878 CDS
T02283
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
pps
Pan paniscus (bonobo)
Pathway
pps05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100977878 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100977878 (CIC)
Transcription factors [BR:
pps03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100977878 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
100977878
NCBI-ProteinID:
XP_014198179
Ensembl:
ENSPPAG00000034281
LinkDB
All DBs
Position
20:48373383..48400734
Genome browser
AA seq
2517 aa
AA seq
DB search
MKPMKKACTGLSGPGSGSKSPPATRAKALRRRGAGEGDKPEEEDDEAQQPQPQPGPEEAE
EGEEEEAERGPGAEGPPLELHPGDPAPGPAEDPKGDGEAGRWEPSLSRKTATFKSRAPKK
KYVEEHGAGSSGVAGAPEERVRTPEEASGLGVPPRPPTSTRSSSTDTASEHSADLEDEPA
EACGPGPWPPGSTSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRAL
TFYEGVPGAGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKVRL
SPGPSSQPGPPGSLPQPPQPLHREPEEAVWVARSSLRLLRPPWEPETMLRKPPTGPEEEQ
AEPGATLPPCPAALDPKQPEDAEVSKISFGGNLGTHCEEGEEKHPPALGTPALLPLPPPQ
LLSPPPKSPAFVGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGTAPAARARTPLTAAQQK
YKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGP
GGAGRPAAVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAA
VMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRS
RHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLP
HPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPS
PLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEVRAGGPG
RGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHP
SPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDP
SVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPP
HPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRT
QSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVS
KILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGG
HKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGSAR
PRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGALA
ATGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERV
TDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGYGSA
PSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFL
PTDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAP
APSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEM
GTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYG
APAPPAVQFIAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPT
LPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQS
VPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSV
PVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAG
GHTLPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVG
VSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAA
TILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGS
FEAGASGRPGPAPRQPLEPGPVREPTALESELEGQPTPPAPPPLPETWTPTARSSPPLPP
PAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSS
GRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVL
PSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAK
CEGDIFTFDRTGTEAEDVLGELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATA
AFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTP
SPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPGPSTAATGR
NT seq
7554 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgcactggcctttcaggtcctggcagtggcagcaagtcc
cccccagccaccagggccaaggctctgaggcggcgaggggctggggagggtgacaagcca
gaggaggaggacgacgaggcacagcagccgcaaccacagcccgggcccgaagaggctgag
gaaggggaggaggaggaggctgagcggggccctggggctgaaggtcctccactggagctg
caccctggcgacccggctccaggcccagcagaggaccccaaaggggatggggaggcaggc
cgctgggagccctcactcagccgcaagacagccacgttcaagtctcgagcgcccaagaag
aagtatgtggaggagcacggagctggcagcagtggggtggctggggcccctgaagagcgg
gtgcggacccctgaggaggccagtggcctgggggtgcctccacggccacccacctccact
cgttcctcctccactgacacagccagcgagcactcggcggacctggaggatgagccggct
gaggcttgtggtccaggcccttggccccctggcagcaccagtggcagctatgacctgcgg
cagctgcggtcccagcgggtgctggctcggcgtggtgacggcctcttcctgccggctgtg
gtgcgccaggtgcgccgaagccaggacctgggcgtgcagttccctggtgaccgagccctg
actttctatgagggggtgccaggcgctggtgtggatgtagttttggatgccacaccccca
ccaggtgccctggtggtgggcacagctgtctgtacctgtgtggagcccggcgtggctgcc
taccgggaaggtgtggtggtggaggtggccaccaagccagctgcctacaaggtccgtctc
agccctggccccagctcacagccaggcccaccaggcagcctcccgcagcccccacagcca
ctgcaccgtgagccagaggaggctgtgtgggtggcccgctccagcctacgcctgctgcgc
cccccctgggaacctgagaccatgctgaggaagccccctacaggccctgaggaagagcag
gcagagcctggggccaccctgccaccctgccctgctgccctggaccccaaacagcccgag
gacgctgaggtctctaagatcagctttggtggcaacctgggtactcactgtgaggagggc
gaggagaagcaccctccagccctgggtaccccagccctgctcccactgcccccaccccag
ctcctgtcaccaccacccaagtctccagcctttgtgggccccggccgccctggcgagcag
ccctcgccctgccaggaggggagccagggcggcagccgcagcagcagcgtggcctccctg
gaaaaggggacagcaccggcagcccgggcccgcacgccactgacagccgcccagcagaag
tacaagaagggcgatgtggtctgcacacccagcggaatacgaaagaagttcaacggcaag
cagtggcgccggctgtgctcacgagatggctgcatgaaggagtcacagcggcgaggctac
tgctcacgccacctgtccatgcgaaccaaagagatggaaggcctggcagacagtgggcct
ggcggggcgggccggcccgcggccgtggcagcccgtgagggcagcacggagtttgactgg
ggtgatgagacgtcgagggacagtgaggccagcagtgtggcggctcgtggagactcacgg
ccacgcctggtggcccctgctgacttgtcacgctttgagttcgacgagtgtgaggcggcc
gtgatgctggtgtcgctgggcagctcgcgctcaggcacgccctccttctcacccgtctcc
actcaatcgcccttctcaccagccccgtcaccctcaccctcgccactcttcggcttccgc
cctgccaactttagccccatcaatgcctcgccagtcatccagcgcactgcagtccgcagt
cgccacctgagcgccagcacccctaaggcaggcgtgctgacgccaccagacctgggcccc
cacccaccgccacctgccccccgagagcgccactcctctggaatcctacccaccttccag
accaacctgaccttcaccgtgcccatcagccctgggcgacggaagacagagctgttgccg
catccaggggccttgggggcccctggcgcagggggtggaggagccgccccagactttccc
aagagtgacagcttagactctggtgtggactcagtgtcccacacacctacaccctccacg
ccggctggcttccgggccgtgtcccctgctgtgcccttctctcgctcccgccagccctca
ccattgctgctgttgccaccccctgccggcctgacctcggatccagggccctctgtgcgc
agggtgcctgctgtgcagcgggactcacctgttattgtccgcaaccctgatgtgccactg
ccctccaaattccctggggaggtgggcactgctggtgaggtgcgggctgggggacctggg
cggggctgccgtgaaaccccagtgccccctggggtggccagtgggaagcctggcctgccc
ccacctctgccagcccccgtgcccatcaccgtgcctccagctgcaccaactgccgtggcc
cagccgatgcccacctttggcctggcttcttcaccctttcagcctgtggccttccacccc
tcacctgctgccctgttgcctgttttggtgcccagcagctataccagccaccctgccccc
aagaaggaagtcatcatgggccggcctggaacagtgtggacgaatgtggaacctcgctct
gtggctgtgttcccttggcactccttagtccccttcctggcacccagccagcctgacccc
tccgtgcagccgagcgaggcccagcaacctgccagccacccagtggcctccaaccagagc
aaagaacctgctgagtcggcagctgttgctcatgaacggccaccaggtgggacagggagt
gctgaccctgggcggccccctggagccacatgccctgagagcccaggacccggaccccca
caccctttgggggtggtggaatctggtaagggtccgcctcccaccacggaggaggaggcc
tccggccccccaggagagccccggctggacagtgagacagagagtgaccatgatgatgcc
ttcctctccatcatgtctcctgagatccagttgcctctaccgcccggaaaacgtcggacc
cagtccctcagtgccctacccaaggaacgggactcatcttctgagaaggatggacgcagc
cccaacaagcgggagaaggaccacatccggcggcccatgaatgccttcatgatcttcagc
aagcggcaccgggccctggtccaccagcgtcatcccaaccaggacaaccggaccgtcagc
aagatcctgggcgagtggtggtatgccctggggcccaaggagaagcagaagtaccacgac
ctggccttccaggtgaaggaggcccacttcaaggcccacccagattggaagtggtgcaac
aaggaccgaaagaagtccagctcagaggccaagcccacgagcctggggctggcaggaggg
cacaaggagacgcgggagcggagcatgtcggagacgggcactgctgctgcccctggggta
tcctctgagctcctgtccgttgcagcccagacactcctgagctcagacaccaaggctccg
gggagcagctcctgtggggcagaacggctacacacagttgggggacctggctcagcccgg
ccccgagctttctcccacagtggggtacacagcctggacggcggagaagtagacagtcag
gcgctacaggaactgacgcagatggtgtctggccctgcatcatactctggcccaaagcct
tctacccagtatggagctccaggaccctttgcagcccctggtgagggaggtgccttggcg
gccactgggcggcccccgctgctgcccacccgagcttctcgttctcagcgtgcggccagt
gaggacatgacgagtgatgaggagcgcatggtcatctgtgaggaggaaggggatgatgat
gtcattgctgacgatggcttcggcaccactgacattgatctcaagtgcaaggagcgggtg
accgacagcgagagtggggacagctctggggaggacccagagggcaacaagggctttggt
cggaaggtgttttcacctgtgatccgttcctcctttacccactgccgccccccactggac
cctgagcccccagggcccccggatcctcctgtagcctttggcaaaggctatggttccgcc
ccatcctcctctgcgtcctcgcctgcttcctcctcagcctcggcagccacctccttctca
ctgggctcaggaaccttcaaggcccaggagtctggtcagggcagcacagcgggcccccta
cggcccccaccccctggggctgggggtccagcgacaccttccaaggcaacccggttcctc
ccaacggatcctgccaccttccggcgcaagagacctgaaagtgtgggtggcctggagcca
ccaggcccctcagtcatcgcggcccctcccagcggaggaggaaacatcctgcagacactg
gtgctgcccccaaacaaggaggagcaagagggcggtggagccagagtgccctccgccccc
gccccatcactggcctacggggccccagcagctcccctgtcccgtcctgccgccaccatg
gtcaccaatgtggtgcggcctgtcagcagcactcctgtgcccatcgcctctaagcccttc
cccacctctggccgggctgaggcgtctccaaatgacacagcaggtgccaggactgaaatg
ggcactgggtctcgggtgcctgggggctccccgctgggtgtcagcttagtgtattcggac
aagaagtcggcagcagccacctcaccagccccacacttggtggctggacccctgctgggc
actgtggggaaggcgcctgccactgtcactaacctactggtgggcaccccggggtatggg
gcccctgcgccccctgctgtccagttcattgcccagggggcccctggtggtgggaccact
gcgggctcaggagcaggtgctgggagtggccccaatgggccagtacccctgggcatcctg
caaccaggtgccctgggcaaggctgggggaatcacccaggtacagtacatcctgcccacg
ctgccccagcagcttcaggtggcacctgccccagcaccagcccctgggaccaaggcagcg
gctcccagcggccctgcacccaccaccagcatccgtttcaccctcccaccgggcacttcc
accaacggcaaagtcctggccgccactgcacccactcctggcatccccatcctgcagtct
gtaccctccgccccaccccccaaagcccagtcagtttctcccgtgcaggccccgcccccg
ggtggctcagcccagctgctgcctgggaaggtcctagtgcctctggccgcccctagcatg
tcagtgcggggtggaggggccggccagccgctgccactggtgagcccgcccttctcagta
cctgtgcagaatggtgcccagccccccagcaagatcatccagctgaccccggtgcctgtg
agcacacccagcggcctggtgccgcccctgagcccagccacactccctggacccacctct
cagcctcagaaggtcctgttgccctcctccaccagaatcacctatgtgcagtcagcgggc
gggcacacgctgcccctgggtaccagccctgcgtccagccaggctggaacagtcacctcg
tacgggcccacgagctctgtagctctaggcttcacctcgctggggcccagcggccccgcc
ttcgtgcagcccctgctctcagcaggccaagccccactgctggctcccggtcaggtgggc
gtgtcacctgtgcccagtccccagctgccgcctgcctgtgcagcccccggaggtcctgtc
ataacagcgttttactctggcagccctgcacccacctcctcagcacccctggcccagcca
tcccaggcccccccaagcctggtctacactgtggccaccagcacaaccccacctgcagcc
accattctgcccaagggcccgccagcccctgccactgccaccccagccccgactagccct
ttccccagtgccacagcaggttccatgacctacagcttagtggcccccaaggcccagcgg
cccagcccgaaggccccccagaaagtgaaggcagccatcgccagcattcccgtggggtcc
tttgaggcaggtgcctctgggcggcctggccctgcaccccggcagcctctggagcctggc
ccagtccgagagccaactgccctagagtctgagcttgaggggcagcccacaccaccagcc
cctccacccctgccagagacctggactcccacggcccggagcagccccccactgccccca
cctgctgaggagcggaccagcgccaagggccctgagaccatggccagcaaattccccagc
tcatcttcagactggcgcgtccctgggcagggcctggagaatcgtggggagcctcccact
cctcccagcccggccccagctccagccgtagcccctggcggcagcagcgagagcagcagt
gggcgggcagccggggacaccccggagcgcaaggaggcggctggtactggcaagaaggtg
aaggtgcggcccccgcccctgaagaagacctttgactctgtggacaacagggtcctgtca
gaagtggacttcgaagagcgctttgctgagttgcctgagtttcggcctgaggaggtgctg
ccctcccccaccctgcagtctctggccacctcaccccgggccatcctgggctcttaccgc
aagaagaggaagaactccacggacctggattcagcacccgaggaccccacctcgcccaag
cgcaagatgagaagacgctccagctgcagctcggagcccaacacccccaagagtgccaag
tgcgagggggacatcttcacctttgaccgtacaggtacagaagccgaggacgtgcttggg
gagctagagtatgacaaggtgccatactcctccctgcggcgcaccctagaccagcgccgg
gccctggtcatgcagctctttcaggaccatggcttcttcccgtcagcccaggccacagcc
gccttccaggcccgctatgcagacatctttccctccaaggtttgtctgcagttgaagatc
cgtgaggtgcgccagaagatcatgcaggctgccactcccacggagcagccccctggagct
gaggctcctctccctgtaccgccccccactggcactgctgctgcccctgcccccactccc
agccccgcagggggccctgaccccacctcacccagctcggactctggcacggcccaggct
gccccgccactgcctccacccccagagtcgggacctggacagcctggctgggagggggct
ccccagccctcccccccacccccaggtccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
