Pan paniscus (bonobo): 100978542
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Entry
100978542 CDS
T02283
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03020
RNA polymerase
pps03420
Nucleotide excision repair
pps05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100978542 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
100978542 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100978542 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100978542 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pps03400
]
100978542 (POLR2A)
Enzymes [BR:
pps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100978542 (POLR2A)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100978542 (POLR2A)
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100978542 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100978542
NCBI-ProteinID:
XP_008960695
Ensembl:
ENSPPAG00000043734
LinkDB
All DBs
Position
19:15079746..15109789
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctcgggggacagcgcatgcccgctgcgcaccatcaagaga
gtccagttcggagtcctgagtccggatgaactgaagcgaatgtctgtgacggagggtggc
atcaaatacccagagacgactgagggaggccgccccaagcttggggggctgatggacccg
aggcagggggtgattgagcggactggccgctgccaaacatgtgcaggaaacatgacagag
tgtcctggccactttggccacattgaactggccaagcctgtgtttcacgtgggcttcctg
gtgaagacaatgaaagttttgcgctgtgtctgcttcttctgctccaaactgcttgtggac
tctaacaacccaaagatcaaggacatcctggctaagtccaagggacagcccaagaagcgg
ctcacacatgtctacgacctttgcaagggcaaaaacatatgcgagggtggggaggagatg
gacaacaagttcggtgtggaacaacctgagggtgacgaggatctgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgttctggcctagagctgtatgcg
gaatggaagcacgttaatgaggactctcaggagaagaagatcctgctgagtccagagcga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagccc
cgctatgcacggccagagtggatgattgtcacagtgctgcctgtgcccccgctctccgtg
cggcctgctgttgtgatgcagggctctgcccgtaaccaggatgacctgactcacaaactg
gctgacatcgtgaagatcaacaatcagctgcggcgcaatgagcagaacggcgcagcggcc
catgtcattgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gaactgcctggcttgccccgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgggtgcgagggaacctgatgggcaaaagagtggac
ttctcggcccgtactgttatcacccccgaccccaacctctccattgaccaggttggcgtg
ccccgctccattgctgccaacatgacctttgcggagattgtcacccccttcaacattgac
agacttcaagaactagtgcgcagggggaacagccagtacccaggcgccaagtacatcatc
cgagacaatggtgatcgcattgacttgcgtttccaccccaagcccagtgaccttcacctg
cagaccggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactctgcacaaaatgtccatgatggggcatcgggtccgcattctcccctggtct
acctttcgcttgaatcttagtgtgacaactccgtacaatgcagactttgacggggatgag
atgaacttgcacctgccacagtctctggagacgcgagcagagatccaggagctggccatg
gttcctcgcatgattgtcaccccccagagcaatcggcctgtcatgggtattgtgcaggac
acactcacagcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctgatgttcctgtcgacgtgggacgggaaggtcccacagccggccatccta
aagccccggcccctgtggacaggcaagcaaatcttctccctcatcatacctggtcacatc
aattgtatccgtacccacagcacccatcccgatgatgaagacagtggcccttacaagcac
atctctcctggggacaccaaggtggtggtggagaatggggagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcagctggctccctggtccacatctcctacctagagatg
ggtcatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctc
ctcatcgagggtcatactattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggacgtaatagaggtcatcgagaaggca
cacaacaatgagctggagcccaccccagggaacactctgcggcagacgtttgagaatcag
gtgaaccgcattcttaacgatgcccgagacaagactggctcctctgctcagaaatccctg
tctgaatacaacaacttcaagtctatggtcgtgtccggagctaaaggttccaagattaac
atctcccaggtcattgctgtcgtcggacagcagaacgtcgagggcaagcggattccattt
ggcttcaagcaccggactctgcctcacttcatcaaggatgactacgggcctgagagccgt
ggctttgtggagaactcctacctagccggcctcacacccactgagttctttttccacgcc
atggggggtcgtgaggggctcattgacacggctgtcaagactgctgagactggatacatc
cagcggcggctgatcaagtccatggagtcagtgatggtgaagtacgacgcgactgtgcgg
aactccatcaaccaggtggtgcagctgcgctacggcgaagacggcctggcaggcgagagc
gttgagttccagaacctggctacgcttaaaccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaacgcacacatccagaacgagttggagcgggaatttgagcggatgcgg
gaggatcgggaggtgctcagggtcatcttcccaactggagacagcaaggtcgtcctcccc
tgtaacctgctgcggatgatctggaatgctcagaaaatcttccacatcaacccacgcctt
ccctccgacctgcaccccatcaaagtggtggagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactaagtcgacaggcccaggaaaatgccacgctgctc
ttcaacatccacctgcggtccacgttgtgttcccgccgcatggcagaggagtttcggctc
agtggggaggccttcgactggctgcttggggagattgagtccaagttcaaccaagccatt
gcgcatcccggggaaatggtgggggctctggctgcgcagtcccttggagaacctgccacc
cagatgaccttgaataccttccactatgctggtgtgtctgccaagaatgtgacgctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccttcgcttact
gtcttcctgttgggccagtctgctcgagatgctgagagagccaaggatattctgtgccgt
ctggagcatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactatgaaatgcct
gactttgatgtggcccgaatctccccctggctgttgcgggtggagctggatcggaagcac
atgactgaccggaagctcaccatggagcagattgctgaaaagatcaatgctggttttggt
gatgacttgaattgcatctttaatgatgacaatgcagagaagctggtgctccgtattcgc
atcatgaacagcgatgagaacaagatgcaagaggaggaagaggtggtggacaagatggat
gatgatgtcttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaagatc
atcatcacggaggatggggaattcaaggccctgcaggagtggatcctggagacggacggc
gtgagcttgatgcgggtgctgagtgagaaggacgtggaccccgtacgcaccacgtccaat
gacattgtggagatcttcacggtgctgggcattgaagccgtgcggaaggccctggagcgg
gagctgtaccacgtcatctcctttgatggctcctatgtcaattaccgacacttggctctc
ttgtgtgataccatgacctgtcgtggccacttgatggccatcacccgacacggagtcaac
cgccaggacacaggaccactcatgaagtgttcctttgaggaaacggtggacgtgcttatg
gaagcagccgcacacggtgagagtgaccccatgaagggggtctctgagaatatcatgctg
ggccagctggctccggccggcactggctgctttgacctcctgcttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcctgggggctgctggacccaccggc
atgttctttggttcagcacccagtcccatgggtggaatctctcctgccatgacaccttgg
aaccagggtgcaacccctgcctatggcgcctggtcccccagtgttgggagtggaatgacc
ccaggggcagccggcttctctcccagtgctgcgtcagatgccagcggcttcagcccaggt
tactcccctgcctggtctcccacaccgggctccccggggtccccaggtccctcaagcccc
tacatcccttcaccaggtggtgccatgtctcccagctactcgccaacgtcacctgcctac
gagccccgttctcctgggggctacacaccccagagtccctcttattcccccacttcaccc
tcctactcccctacctctccatcctattctccaaccagtcccaactatagtcccacatca
cccagctattcgccaacgtcacccagctactcaccgacctctcccagctactcacccacc
tctcccagctactcgcccacctctcccagctactcgcccacctctcccagctactcaccc
acttcccctagctactcgcccacttcccctagctactcgccaacgtctcccagctactcg
ccgacatctcccagctactcgccaacttcacccagctattctcccacttctcccagctac
tcacctacctctccaagctattcacccacctcccccagctactcacccacttccccaagt
tactcacccaccagcccgaactattctccaaccagtcccaattacaccccaacatcaccc
agctacagcccgacatcacccagctattcacctactagtcccaactacacgcctaccagc
cctaactacagcccaacctctccaagctactctccaacatcacccagctattccccgacc
tcaccaagttactccccttccagcccacgatacacaccacagtctccaacctatacccca
agctcacccagctacagccccagctcgcccagctacagcccaacctcacccaagtacacc
ccaaccagtccttcttacagtcccagctccccagagtataccccaacctctcccaagtac
tcacctaccagtcccaaatattcacccacctctcccaagtactcgcctaccagtcccacc
tattcacccaccaccccaaaatactccccaacatctcctacttattccccaacctctcca
gtctacaccccaacctctcccaagtactcacctactagccccacttactcgcccacttcc
cccaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctcaacctac
tctcccacttcccctggttactcacccaccagccccacctacagtctcacaagcccggct
atcagcccggatgacagtgacgaggagaactga
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integrated database retrieval system
