Pan paniscus (bonobo): 100978757
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Entry
100978757 CDS
T02283
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
pps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100978757 (UPF2)
03015 mRNA surveillance pathway
100978757 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100978757 (UPF2)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100978757 (UPF2)
mRNA cycle factors
P-body specific factors
100978757 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
100978757
NCBI-ProteinID:
XP_008951395
Ensembl:
ENSPPAG00000037953
LinkDB
All DBs
Position
8:complement(24446477..24569667)
Genome browser
AA seq
1272 aa
AA seq
DB search
MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
DSMAEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagactctttaccaaacaac
aaggaaaaagactgcagtgaaaggcggacagtgagcagcaaggagaggccaaaagacgat
atcaagctcactgccaagaaggaggtcagcaaggcccctgaagacaagaagaagagactg
gaagatgataagagaaaaaaggaagacaaggaacgcaagaaaaaagatgaagaaaaggtg
aaggcagaggaagaatcaaagaaaaaagaagaggaagaaaaaaagaaacatcaagaggaa
gagagaaagaagcaagaagagcaggccaaacgtcagcaagaagaagaagcagctgctcag
atgaaagaaaaagaagaatccattcagcttcatcaggaagcttgggaacgacatcattta
agaaaggaacttcgtagcaaaaaccaaaatgctccggacagccgaccagaggaaaacttc
ttcagccgccttgactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaact
attacagaacaacagagagactccttgtcccacgattttaatggcctaaatttaagcaaa
tacattgcagaagctgtagcttccatcgtggaagcaaaactaaaaatctctgatgtgaac
tgtgctgtgcacctctgctctctctttcaccagcgttatgctgactttgccccatcactt
cttcaggtctggaaaaaacattttgaagcaaggaaagaggagaaaacacctaacatcacc
aagttaagaactgatttgcgttttattgcagaattgacaatagttgggattttcactgac
aaggaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggag
tcccacactcatgtctctgtagtgattagtttctgtcgacattgtggagatgatattgct
ggacttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcct
agtgagataattagtccagagaaacaacagcccttccagaatcttttaaaagagtacttt
acgtctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaa
aacaggcgcattctacattctaaaggggagctcagtgaagatagacataaacagtatgag
gaatttgctatgtcttaccagaagctgctggcaaattctcaatccttagcagaccttttg
gatgaaaatatgccagatcttcctcaagacaaaccaacaccagaagaacatgggcctgga
attgatatattcacacctggtaaacctggagaatatgacttggaaggtggtatatgggaa
gatgaagatgctcggaatttttatgagaacctcattgatttgaaggcttttgtcccagcc
atcttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaacaaagatgatacc
aaagaggcaaaagaatctaaggagaataaggaggtatcaagtcccgatgatttggaactt
gagttggagaatctagaaattaatgatgacaccttagaattagagggtggagatgaagct
gaagatcttacaaagaaacttcttgatgaacaagaacaagaagatgaggaagccagcact
ggatctcatctcaagctcatagtagatgctttcctacagcagttacccaactgtgtcaac
cgagatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaac
aggaagaagttggtacgggcactcttcatagttcctagacaaaggttggatttgctacca
ttttatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctt
tgttccatgctgaggggggatttcagatttcatgtacggaaaaaggaccagatcaatatt
gaaacaaagaataaaactgttcgttttataggagaactaactaagtttaagatgttcacc
aaaaatgacacactgcattgtttaaagatgcttctgtcagacttctctcatcaccatatt
gaaatggcatgcaccctgctggagacatgtggacggtttcttttcagatctccagaatct
cacctgaggaccagtgtacttttggagcaaatgatgagaaagaagcaagcaatgcatctt
gatgcgagatacgtcacaatggtagagaatgcatattactactgcaacccacctccagct
gaaaaaaccgtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtac
aaggatctctctaaggttaccaccgagaaggttttgagacagatgcgaaagctgccctgg
caggaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaa
tataatagtattcattgtgtagccaacctcttagcaggactagtgctctaccaagaggat
gttgggatccacgttgtggatggagtgttagaagatattcgattaggaatggaggttaat
caacctaaatttaatcagaggcgcatcagcagtgccaagttcttaggagaactttacaat
taccgaatggtggaatcagctgttattttcagaactctgtattcttttacctcatttggt
gttaatcctgatggctctccaagttccctggacccacctgagcatcttttcagaattaga
ctcgtatgcactattctggacacatgtggccagtactttgacagaggttccagtaaacga
aaacttgattgtttccttgtatattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacacta
gaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggta
caagacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactcaaaa
gattctatggcagaaggagaaaatcttgaagaggatgaagaagaagaagaaggtggggct
gaaacggaagaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggt
tctgataatgatgatgatgagggagaagaagaggaggaagagaatacagattaccttaca
gattccaataaggaaaatgaaaccgatgaagagaatactgaggtaatgattaaaggcggt
ggacttaagcatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatg
atgctagaaaatctacagcaacgaagtggtgaatctgttaaagtgcaccaactagatgtt
gccattcctttgcatctcaaaagccagctgaggaaagggcccccactgggaggtggggaa
ggagaggctgagtctgcagacacaatgccgtttgtcatgttaacaagaaaaggcaataaa
cagcagtttaagatccttaatgtacccatgtcctctcaacttgctgcaaatcattggaac
cagcaacaggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaat
gaacggcaagaacaggaagattatcaagaaatgttgcagtctcttgcacagcgcccagct
ccagcaaacaccaatcgtgagaggcggcctcgctaccaacatccgaagggagcacctaat
gcagatctaatctttaagactggtgggaggagacgttga
DBGET
integrated database retrieval system
