Pan paniscus (bonobo): 100979247
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Entry
100979247 CDS
T02283
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03030
DNA replication
pps03410
Base excision repair
pps03420
Nucleotide excision repair
pps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100979247 (RFC5)
03410 Base excision repair
100979247 (RFC5)
03420 Nucleotide excision repair
100979247 (RFC5)
03430 Mismatch repair
100979247 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pps03032
]
100979247 (RFC5)
03036 Chromosome and associated proteins [BR:
pps03036
]
100979247 (RFC5)
03400 DNA repair and recombination proteins [BR:
pps03400
]
100979247 (RFC5)
DNA replication proteins [BR:
pps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100979247 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
100979247 (RFC5)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100979247 (RFC5)
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100979247 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
100979247 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
DUF815
AAA_14
DEAD
ResIII
AAA_5
ATPase_2
AAA_19
TIP49
AAA_30
PhoH
nSTAND3
TniB
AAA_7
DNAX_ATPase_lid
Thioredoxin_6
Mg_chelatase
NPHP3_N
bpMoxR
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
100979247
NCBI-ProteinID:
XP_034790504
Ensembl:
ENSPPAG00000043958
LinkDB
All DBs
Position
10:126080598..126096663
Genome browser
AA seq
340 aa
AA seq
DB search
METSALKQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcactcaagcagcaggagcagcccgcggcgaccaagatcaggaacctg
ccctgggttgaaaaataccggccacagaccctgaatgatctcatttctcatcaggacatt
ctgagtaccattcagaagtttatcaatgaagaccgactgccacacttgcttctctacggt
cccccagggacaggcaagacatctaccatcctagcctgtgcgaaacagctatataaagac
aaagaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagacatc
gttcgaggaccgatcctgagctttgctagcacaaggacaatatttaagaaaggctttaag
ctagtgatcttggatgaagcagacgccatgactcaggacgcccagaatgccttgagaaga
gtaattgagaaattcacagaaaataccagattctgcctcatctgtaactatctgtcaaag
atcatccctgccttgcagtcccgctgcacgaggtttcggttcggtcccctgactcctgaa
ctcatggttccccgcctggaacatgtcgtggaagaagagaaagttgatataagtgaagat
ggaatgaaagcactagtcactctttccagcggagacatgcgcagggctctgaacattttg
cagagcaccaatatggcctttgggaaggtgacagaggagactgtctacacctgcaccggg
cacccgctcaagtcagacattgccaacatcctggactggatgttgaatcaagatttcacc
acagcctacagaaatattacagaattgaaaactctgaaggggttggcactgcatgatatc
ctgacagagatacacttgtttgtgcatagagttgactttccatcttcagttcgaatacat
ttattgaccaaaatggcagacattgagtacaggctttctgttggcaccaacgagaagatc
cagctgagctccctcattgctgcatttcaagtcaccagagacctgattgttgcagaggcc
tag
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integrated database retrieval system
