Pan paniscus (bonobo): 100979365
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Entry
100979365 CDS
T02283
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100979365 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pps03041
]
100979365 (PRPF8)
Spliceosome [BR:
pps03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100979365 (PRPF8)
Complex C
U5 SnRNP specific factors
100979365 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100979365
NCBI-ProteinID:
XP_003816897
Ensembl:
ENSPPAG00000042753
UniProt:
A0A2R9CE78
LinkDB
All DBs
Position
19:complement(9223458..9257176)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttatcgagggccgggtaacccggtgcctggccctctagccccg
ctaccggactacatgtcggaggagaagctgcaggagaaagctcgaaaatggcagcaattg
caggccaagcgctatgcagaaaagcggaagtttgggtttgtggatgcccagaaggaagac
atgcccccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtttacttgggtgccctaaagtacatgccccacgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttccttcgtcaatgagattccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgccgagaaaaaagagataggaggcat
ttcaagaggatgcgttttcccccttttgatgatgaggagccgcccttggactatgctgac
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaggaggac
gcccctgtgttggactggttctatgaccaccagccgttgagggacagcaggaagtatgta
aatggctccacttaccagcgctggcagttcacactacctatgatgtcgactctctaccgc
ctggctaatcagctcctgacggacttggtggatgacaactacttctacctgtttgatttg
aaggccttctttacgtccaaggcactcaatatggccattcctggaggacccaaatttgaa
cctcttgttcgagacatcaacctacaggatgaagactggaatgaattcaacgatattaac
aagattatcatccggcagcctatccgcactgagtacaagattgcttttccttacttgtac
aacaatcttccacaccatgtccacctcacctggtaccatactcccaatgttgtattcatc
aaaactgaggatcctgatttgccagctttctactttgaccctttgatcaacccaatctcc
cataggcactcggtcaagagccaggaaccattgccggatgatgatgaggaatttgagctc
ccggagtttgtggagcccttcctaaaggacacacccctctatacagacaatacagccaat
ggcattgccctgctctgggccccgcggcccttcaacctacgctctggtcgcacccgtcgg
gccctggacataccccttgtcaagaactggtatcgggagcattgtcctgccgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
catcggccccctaaggctcaaaagaagaggtatttgttccgctccttcaaagccaccaaa
ttctttcagtccacaaagctggactgggtggaggttgggctccaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgcaaaaacctcaactacctgcacctggactac
aacttcaacctcaagcctgtgaaaacgctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccacctgtgtcgggaagttctgcgtttgactaagctggtggtggatagt
cacgtgcagtatcggctgggcaatgtggatgccttccagctggcagatggattgcagtat
atatttgcccatgttgggcagttgacgggcatgtatcgatacaaatacaagctgatgcga
cagattcgcatgtgcaaggacctgaagcatctcatctattatcgtttcaacacgggccct
gtagggaagggtcctggctgtggcttctgggctgccggttggcgagtctggctgtttttc
atgcgtggcattacccctttgttggagcgatggcttggcaacctcctggcccggcagttt
gaaggtcgacactcaaagggggtggcaaagacagtaacaaagcagcgagtggagtcacat
tttgaccttgagctgcgggcagctgtgatgcatgatattctggacatgatgcctgaaggg
atcaagcagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg
aaagccaacattccctggaaggtccccgggctgccgacgcccatagagaatatgatcctt
cgatacgtgaaggccaaggctgactggtggaccaacactgcccactacaaccgagaacgg
atccgccgaggggccactgtggacaagactgtttgtaaaaagaatctgggccgcctcacc
cggctctatctgaaggcagaacaggagcggcagcacaactacctgaaggacgggccttac
atcacagcggaggaagcagtggcagtatataccaccacagtgcattggttggaaagccgc
aggttttcacccatcccattccccccactctcctataagcatgacaccaagttgctcatc
ttggcattggagcggctcaaggaagcttatagtgtgaagtctcggttgaaccagtctcag
agggaggagctaggtctgatcgagcaggcctacgataacccccacgaggcgctgtcccgc
atcaagcgtcacctcctcacacagagagccttcaaagaggtgggcattgagttcatggat
ctctatagccacctcgttccagtatatgacgttgagcccctggagaagataactgatgct
tacctggaccagtacctgtggtatgaagccgacaagcgccgcctgttcccaccctggatt
aagcctgctgacacagaaccacctccgctgcttgtttacaagtggtgtcaaggcatcaat
aacctgcaggacgtgtgggagacgagtgaaggcgagtgcaatgtcatgctggaatcccgc
tttgagaagatgtatgagaagatcgacttgactctgctcaataggctgctgcgcctcatc
gtggaccacaacatagccgactacatgacagccaagaacaacgtcgtcatcaactataag
gacatgaaccatacgaattcatatgggatcatcagaggcctgcagtttgcctcattcatc
gtgcagtattatggcctggtgatggatttgcttgtattgggattgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgattcaacgttacctgacagagcaccctgacccc
aataatgaaaacatcgttggctacaataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaaacatgatgttaacttaggccgggcagtattctgggacatcaagaaccgc
ttgccacggtcagtgactacagttcagtgggagaacagcttcgtgtctgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggcttcgagtgccgcatcctgcctaagtgc
cgcaccagctatgaggagttcacccacaaggacggggtctggaacctgcagaatgaggtt
actaaggagcgcacagctcagtgtttcctgcgtgtggacgatgagtcaatgcagcgcttc
cacaaccgcgtgcgtcagattctcatggcctctgggtccaccaccttcaccaagattgtg
aataagtggaatacagctctcattggccttatgacatactttcgggaggctgtggtgaac
acccaagagctcttggacttactggtgaagtgtgagaacaagatccagacacgtatcaag
attggactcaactccaagatgccaagtcggttccccccggttgtgttctacacccctaag
gagctgggtggactcggcatgctctcaatgggccatgtgctcatcccccaatccgacctc
aggtggtccaaacagacagatgtaggtatcacacactttcgttcgggaatgagccatgaa
gaagaccagctcattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gattctcagcgggtctgggctgagtacgcactcaagaggcaagaggccattgctcagaac
agacgcctgactttagaagacctagaagattcatgggatcgtggcattcctcgaatcaat
accctcttccagaaggaccggcacacactggcttatgataagggctggcgtgtcagaact
gactttaagcagtatcaggttttgaagcagaatccgttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggcggt
gtggaaggcattctggaacacacactctttaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggctttgaggaatctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtccccg
accattaatcgagccaatgtatatgtaggctttcaggtgcagctagacctgacgggtatc
ttcatgcacggcaagatccccacgctgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccatgagagcatcgttatggacttatgtcaggtgtttgaccaggaa
cttgatgcactggaaattgagacagtacaaaaggagacaatccatccccgaaagtcatat
aagatgaactcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctggctgactccaaggatgtgatggacagcaccaccacccagaaatac
tggattgacatccagttgcgctggggggactatgattcccacgacattgagcgctacgcc
cgggccaagttcctggactacaccaccgacaacatgagtatctacccttcgcccacaggt
gtactcatcgccattgacctggcctataacttgcacagtgcctatggaaactggttccca
ggcagcaagcctctcatacaacaggccatggccaagatcatgaaggcaaaccctgccctg
tatgtgttacgtgaacggatccgcaaggggctacagctctattcatctgagcccactgag
ccttatttgtcttctcagaactatggtgagctcttctccaaccagattatctggtttgtg
gatgacaccaacgtctacagagtgactattcacaagacctttgaagggaacttgacaacc
aagcccatcaacggagccatcttcatcttcaacccacgcacagggcagctgttcctcaag
ataatccacacgtccgtgtgggcgggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggccgccctgatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccactggaggtgcacttactggacttcccc
aatattgtcatcaaaggatcggagctccaactccctttccaggcgtgtctcaaggtggaa
aaatttggggatctcatccttaaagccactgagccccagatggttctcttcaacctctat
gacgactggctcaagactatttcatcttacacggccttctcccgtctcatcctgattctg
cgtgccctacatgtgaacaatgatcgggcaaaagtgatcctgaagccagacaagactact
attacagaaccacaccacatctggcccactctgactgacgaagaatggatcaaggtcgag
gtgcagctcaaggatctgatcttggctgactacggcaagaaaaacaatgtgaacgtggca
tcactgacacaatcagaaattcgagacatcatcctgggtatggagatctcggcaccgtca
cagcagcggcagcagatcgctgagatcgagaagcagaccaaggaacaatcgcagctgacg
gcaacacagactcgcactgtcaacaagcatggcgatgagatcatcacctccaccaccagc
aactatgagacccagactttctcatccaagactgagtggagggtcagggccatctctgct
gccaacctgcacctaaggaccaatcacatctatgtttcatctgacgacatcaaggagact
ggctacacctacatccttcccaagaatgtgcttaagaagttcatctgcatatctgacctt
cgggcccaaattgcaggatacctatatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtgccgcagtggggcactcaccagaccgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtccccacagttatcaccccaggatgtcaccacccacgccaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacatgcagcttcacacca
ggctcctgtacactgacggcctacaagctgacccccagtggctacgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctgccttcacactatgagagggtgcag
atgctgctgtcggaccgtttccttggcttcttcatggtccctgcccagtcctcgtggaac
tataacttcatgggtgttcggcatgaccccaacatgaaatatgagctacagctggcgaac
cccaaagagttctaccacgaggtgcacaggccctcccacttcctcaactttgctctcctg
caggagggggaggtttactctgcggatcgggaggacctgtatgcctga
DBGET
integrated database retrieval system
