Pan paniscus (bonobo): 100979484
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Entry
100979484 CDS
T02283
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100979484 (SMG9)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100979484 (SMG9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
BrxC-PglY_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
100979484
NCBI-ProteinID:
XP_003817625
Ensembl:
ENSPPAG00000030299
UniProt:
A0A2R9AAK9
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Position
20:complement(49893534..49917912)
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AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSV
MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPE
GTTPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLQQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctggacacagtcagcctggactctatgggatagagcggcggcgacggtgg
aaggagcctggctctggtggcccccagaatctctctgggcctggtggtcgggagagggac
tacattgcaccatgggaaagagagagaagggatgccagcgaagagacaagcacttccgtc
atgcagaaaacccccatcatcctctcaaaacctccagcagagcggtcaaaacagccacca
cctccaacagcccctgctgccccgcctgctccagcccctctggagaagcccatcgttctc
atgaagccacgggaggaggggaaggggcctgtggccgtgacaggtgcctctacccctgag
ggcaccaccccaccaccccctgcagcccctgcgccacccaagggggagaaggaggggcag
agacccacacagcctgtgtaccagatccagaaccggggcatgggcactgccgcaccagca
gccatggaccctgtcgtgggtcaggccaaactactgcccccagagcgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgtgacagtgccatcgagtacctgttggat
cagactgatgtgttggtggttggtgtcctgggtctccaggggacaggcaagtccatggtc
atgtcattgttgtcagccaacactccagaggaggaccagaggacttatgttttccgggcc
cagagtgctgaaatgaaggaacgagggggcaaccagaccagtggcatcgacttctttatt
acccaagaacggattgttttcctggacacacagcccatcctgagcccttctatcctagac
catctcatcaataatgaccgcaaactgcctccagagtacaaccttccccacacttacgtt
gagatgcagtcactccagattgctgccttccttttcacggtctgccatgtggtgattgtt
gtccaggactggttcacagacctcagtctctacaggttcctgcagacagcagagatggtg
aagccctccaccccatcccccagccacgagtccagcagctcatcgggctccgatgaaggc
accgagtactacccccacctagtcttcttgcagaacaaagctcgccgagaggacttctgt
cctcggaagctgcagcagatgcacctgatgattgaccagctcatggcccactcccacctg
cgttacaaggggactctgtccatgttacaatgcaatgtcttcccggggcttccacctgac
ttcctggactctgaggtcaacttattcctggtacccttcatggacagtgaagcagagagt
gaaaacccaccaagagcaggacctggttccagcccactcttctccctgctgcctgggtat
cgtggccaccccagtttccagtccttggtgagcaagctccggagccaagtgatgtccatg
gcccggccacagctgtcacacacgatcctcaccgagaagaactggttccactacgctgcc
cggatctgggacggggtgagaaagtcctctgctctggcagagtacagccgcctgctggcc
tga
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