Pan paniscus (bonobo): 100980240
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Entry
100980240 CDS
T02283
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03082
ATP-dependent chromatin remodeling
pps04714
Thermogenesis
pps05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100980240 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100980240 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100980240 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pps03021
]
100980240 (SMARCD1)
03036 Chromosome and associated proteins [BR:
pps03036
]
100980240 (SMARCD1)
Transcription machinery [BR:
pps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100980240 (SMARCD1)
Chromosome and associated proteins [BR:
pps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100980240 (SMARCD1)
PBAF complex
100980240 (SMARCD1)
GBAF(ncBAF) complex
100980240 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
100980240
NCBI-ProteinID:
XP_003825905
Ensembl:
ENSPPAG00000032789
UniProt:
A0A2R9AW81
LinkDB
All DBs
Position
10:complement(44088755..44104201)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccaagcggcggcgccggagcctcagga
ggggcgggcgcggctgctgccttgggcccgggcggaactccggggcctcctgtgcgaatg
ggcccggctccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgttgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggatcagtcccgc
aagagacctgcccctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaagaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccactaaacaaaagaggaagttctcttccttttttaagtccttg
gtgattgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagaccgatggctttcaggtgaagcggccgggagacgtgaatgta
cggtgtactgtcctactgatgctggattaccagcctccccagtttaaattagacccccgc
ctagctcgactcctgggcatccatacccagactcgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggaccctcacgagcgggagtttgtcatctgtgac
aagtacctgcagcagatctttgagtctcaacgtatgaagttttcagagatccctcagcgg
ctccatgccttgcttatgccaccagaacctatcatcattaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgttgaagtggatgacaccttg
aagacccagatgaattcttttctgctgtccactgccagccaacaggagattgctactcta
gacaacaagatccatgagacaatagaaaccatcaaccagctgaagactcagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
agggacctcaagacaatgactgatgtggtgggtaacccagaggaggagcgccgagctgag
ttctacttccagccctgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccggaatacatag
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