KEGG   Pan paniscus (bonobo): 100980553
Entry
100980553         CDS       T02283                                 
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pps03009]
    100980553 (DCAF13)
   04121 Ubiquitin system [BR:pps04121]
    100980553 (DCAF13)
Ribosome biogenesis [BR:pps03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100980553 (DCAF13)
Ubiquitin system [BR:pps04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100980553 (DCAF13)
SSDB
Motif
Pfam: Sof1 WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st eIF2A ANAPC4_WD40 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 100980553
NCBI-ProteinID: XP_003821780
Ensembl: ENSPPAG00000029408
UniProt: A0A2R9AAG8
LinkDB
Position
7:120780993..120809175
AA seq 597 aa
MQWPPPWRRSPLVSATPPPGPTTGLLCPRRVSEAGDSSTEGARTGHSHYVTPAESAMERR
SQPFPSLRPASPTNAPAHGRGSDCTAKEPPLANVCRQNYGAAQDPVEPAGRRSASHVTGS
SLGKAEVACGRRWRWAELVANSSWSPAGRATEMKVKMLSRNPDNYVRETKLDLQRVPRNY
DPALHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPENLATVLSGACD
GEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGPGCGDEEE
PLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIE
TFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDM
RALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHV
ICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIK
RIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSVPIVSEKKKHVVAVVK
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgcagtggccgccaccgtggcgacggtcgccccttgtgagcgcaaccccacctccggga
ccaacgacaggactcttatgcccaaggcgcgtgagcgaagccggagactctagtactgag
ggggcaagaacggggcacagccactacgtcacgccggcggaaagcgcgatggagaggagg
tcccagcctttcccgagtctccgccctgcctcgcccacaaatgctccagcccacggacgc
ggaagcgactgcaccgctaaagaaccgccccttgctaacgtttgccggcaaaactacgga
gcggcgcaggatccagttgagccagcaggccgccgctccgcgagtcacgtgactggaagt
agtctgggaaaagcggaagtcgcctgtgggaggaggtggcggtgggcggaactcgtagcg
aacagctcgtggagtccggccggaagagcaaccgagatgaaggtgaagatgctgagccgg
aatccggacaattatgtccgcgaaaccaagttggacttacagagagttccaagaaactat
gatcctgctttacatccttttgaggtcccacgagaatatgtaagagctttaaatgctacc
aaactggaacgagtatttgcaaaaccattccttgcttcgctggatggtcaccgtgatgga
gtcaattgcttggcaaagcatccagagaacctggctactgtcctttctggggcgtgtgat
ggagaggttagaatttggaatctaactcagcggaattgtatccgtacaatacaagcacat
gaaggctttgtacgaggaatatgtactcgcttttgtgggacttcttttttcactgttggt
gatgacaaaactgtgaagcagtggaaaatggatgggccaggctgtggagacgaggaagag
ccattacatacaatattaggaaagacagtgtatactgggattgatcatcactggaaagaa
gctgtttttgccacatgtggacagcaagtagacatttgggatgaacaaagaactaatcct
atatgttcaatgacctggggatttgacagtataagtagtgttaaatttaacccaattgag
acatttctcttgggaagttgtgcatctgacaggaatatagtactgtacgatatgaggcaa
gctactcctttgaaaaaggttatcttagatatgagaacaaatacaatctgttggaaccct
atggaagctttcatttttacagcagcaaatgaagattataacttatatacttttgatatg
cgtgcactggacactcctgtaatggtccatatggatcatgtatctgcagtgcttgatgtg
gattactctcccactgggaaggagtttgtgtctgctagtttcgataaatctattcgaatc
tttcctgtagacaaaagtcgaagcagggaggtatatcatacaaagagaatgcaacatgtt
atctgtgtaaaatggacttctgacagcaagtatattatgtgtggatctgatgaaatgaac
attcgcctgtggaaagctaatgcttctgaaaaattgggtgtgcttacatcacgagaaaaa
gcagccaaggattataaccagaaattgaaggagaaatttcagcattatcctcatataaaa
cgtatagctcgtcatcgacatctaccaaaatctatctatagccagattcaggaacagcgc
atcatgaaagaagctcgtcgacgaaaggaagtgaatcgtattaaacacagcaagcctgga
tctgtgccaattgtgtcagagaagaagaaacacgtagtggcagttgtaaaataa

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