Pan paniscus (bonobo): 100980865
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Entry
100980865 CDS
T02283
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03030
DNA replication
pps03420
Nucleotide excision repair
pps03430
Mismatch repair
pps03440
Homologous recombination
pps03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100980865 (RPA1)
03420 Nucleotide excision repair
100980865 (RPA1)
03430 Mismatch repair
100980865 (RPA1)
03440 Homologous recombination
100980865 (RPA1)
03460 Fanconi anemia pathway
100980865 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100980865 (RPA1)
03032 DNA replication proteins [BR:
pps03032
]
100980865 (RPA1)
03400 DNA repair and recombination proteins [BR:
pps03400
]
100980865 (RPA1)
Transcription factors [BR:
pps03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100980865 (RPA1)
DNA replication proteins [BR:
pps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100980865 (RPA1)
DNA repair and recombination proteins [BR:
pps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100980865 (RPA1)
MMR (mismatch excision repair)
100980865 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100980865 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
100980865
NCBI-ProteinID:
XP_003816902
Ensembl:
ENSPPAG00000039680
UniProt:
A0A2R9BVF9
LinkDB
All DBs
Position
19:9401164..9475584
Genome browser
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQKGDTTIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GLGQPQVAPPAPAASPAASSRPQPQNGSSGVGSTVSKAYGASKTFGKATGPSLSHTSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPNIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GHNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYR
EYGRRLVMSIRRSALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggccatcatgcagaagggggatacaacc
ataaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccgccg
cgttatcgactgctcatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgtggaggaagaacaattgtccagcaactgtgtatgccagattcac
agatttattgtgaacactctgaaagacggaaggagagtagttatcttgatggaattagaa
gttttgaagtcagctgaagcagttggagtgaagattggcaatccagtgccctataatgaa
ggactcgggcagccgcaagtagctcctccagcgccagcagccagcccagcagcaagcagc
aggccccagccgcagaatggaagctcgggagtgggttctactgtttctaaggcttatggt
gcttcaaagacatttggaaaagctacaggtcccagcctgtcacacacttctgggggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccaatccaagtggaccatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctctctagaactggttgatgaaagtggtgaaatccgagccacagctttcaatgag
caagtggacaagttctttcctcttattgaagtgaacaaggtgtattatttctcgaaaggc
accctgaagattgctaacaagcagttcacagctgttaaaaatgactatgagatgaccttc
aataacgagacttccgtcatgccctgtgaggacgaccgtcatttacctacggttcagttt
gatttcacggggattgatgacctcgagaacaagtcgaaagactcacttgtagacatcatc
gggatctgcaagagctatgaagacgccactaaaatcacagtgaggtctaacaacagagaa
gttgccaagaggaatatctacttgatggacacatccgggaaggtggtgactgctacactg
tggggggaagatgctgataaatttgatggttctagacagcccgtgctggctatcaaagga
gcccgagtctctgatttcggtggacggagcctctctgtgctgtcttcaagcactatcatt
gcgaatcctaacatcccagaggcctataagcttcgtggatggtttgacgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagtcggagggagtaacacc
aactggaaaaccttgtatgaggtcaaatccgagaacctgggccaaggcgacaagccggac
tactttagttctgtggccacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgatcgatcaacagaatggattgtaccgctgt
gagaagtgcgacaccgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacacaatgctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtggagacc
tacaacgacgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gagtatggccgaaggctggtcatgagcatcaggagaagtgcattgatgtga
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